RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
LINC00628-201ENST00000628516 SLC23A1Q9UHI7 598 aa12.86□□□□□ -0.35
LINC00628-201ENST00000628516 IGKV1D-8A0A087WSZ0 117 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 IGKV1-6A0A0C4DH72 117 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 SMIM31A0A1B0GVY4 71 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 DPPA5A6NC42 116 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 CTDSP2O14595 271 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 RGS5O15539 181 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 OR5H8P0DN80 308 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 SLIRPQ9GZT3 109 aaKnown RBP12.85□□□□□ -0.35
LINC00628-201ENST00000628516 MIXL1Q9H2W2 232 aa12.85□□□□□ -0.35
LINC00628-201ENST00000628516 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
LINC00628-201ENST00000628516 ZNF701M0R085 212 aaPredicted RBP12.84□□□□□ -0.35
LINC00628-201ENST00000628516 NBR2O15453 112 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 HSPA12AO43301 675 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 FCER2P06734 321 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 PSMB8P28062 276 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 IGSF11Q5DX21 431 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 OR4A4PQ8NGN8 299 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
LINC00628-201ENST00000628516 PARP12Q9H0J9 701 aaKnown RBP12.84□□□□□ -0.35
LINC00628-201ENST00000628516 IFI27L2Q9H2X8 130 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 PIPOXQ9P0Z9 390 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 ZMAT5Q9UDW3 170 aaKnown RBP12.84□□□□□ -0.35
LINC00628-201ENST00000628516 ZNF580Q9UK33 172 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 WSB1Q9Y6I7 421 aa12.84□□□□□ -0.35
LINC00628-201ENST00000628516 NBEAL2Q6ZNJ1 2754 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 MEIS3P1A6NDR6 274 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 BET1O15155 118 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 ATP6V0E1O15342 81 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 HLA-DRB1P01911 266 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 CEACAM6P40199 344 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 DGCR2P98153 550 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00628-201ENST00000628516 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 FAM71F2Q6NXP2 309 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 Q6ZS49 121 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 SNX29P2Q8IUI4 249 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 LAX1Q8IWV1 398 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 GVQW1Q8N7I0 195 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 MCFD2Q8NI22 146 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
LINC00628-201ENST00000628516 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 G3V318 75 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 RAB29O14966 203 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 ZBTB25P24278 435 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 LUMP51884 338 aaPredicted RBP12.82□□□□□ -0.36
LINC00628-201ENST00000628516 CD69Q07108 199 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 RPL39P5Q59GN2 51 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 VAX1Q5SQQ9 334 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 FAM131AQ6UXB0 335 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 NPBQ8NG41 125 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 DGCR14Q96DF8 476 aaKnown RBP12.82□□□□□ -0.36
LINC00628-201ENST00000628516 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 NDUFA13Q9P0J0 144 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 ADAM30Q9UKF2 790 aa12.82□□□□□ -0.36
LINC00628-201ENST00000628516 COL7A1Q02388 2944 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 CT45A6P0DMU7 189 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 CT45A5P0DMU8 189 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 CT45A7P0DMV0 189 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 PPIFP30405 207 aaKnown RBP12.81□□□□□ -0.36
LINC00628-201ENST00000628516 PRSS3P35030 304 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 CBX5P45973 191 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 CNIH2Q6PI25 160 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 GLDNQ6ZMI3 551 aaPredicted RBP12.81□□□□□ -0.36
LINC00628-201ENST00000628516 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 BEST4Q8NFU0 473 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 NXF2Q9GZY0 626 aaKnown RBP12.81□□□□□ -0.36
LINC00628-201ENST00000628516 IFT46Q9NQC8 304 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
LINC00628-201ENST00000628516 TRBV6-7A0A0A0MS04 114 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 RAMP3O60896 148 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 NDUFA3O95167 84 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
LINC00628-201ENST00000628516 PLGLAQ15195 96 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 RNASE12Q5GAN4 147 aaKnown RBP12.8□□□□□ -0.36
LINC00628-201ENST00000628516 MYOZ3Q8TDC0 251 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
LINC00628-201ENST00000628516 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
LINC00628-201ENST00000628516 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms