RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 GNRHRP30968 328 aa19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 SUPT4H1P63272 117 aaKnown RBP19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 MEF2CQ06413 473 aaPredicted RBP19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 OR13A1Q8NGR1 328 aa19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 CFHR4Q92496 578 aa19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 AKR1E2Q96JD6 320 aa19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 DCTN5Q9BTE1 182 aa19.47■□□□□ 0.71
CAPNS1-216ENST00000628306 DBX1A6NMT0 343 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 BOLA2-SMG1P6H3BVE0 249 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 GPR37O15354 613 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 HBZP02008 142 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 ABCA11PQ4W5N1 156 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 COQ8AQ8NI60 647 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 C17orf50Q8WW18 174 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 FYTTD1Q96QD9 318 aaKnown RBP19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 MGAT4CQ9UBM8 478 aa19.46■□□□□ 0.71
CAPNS1-216ENST00000628306 GPR31O00270 319 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 B3GALNT1O75752 331 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 C1QBP02746 253 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 VAMP1P23763 118 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 SAA4P35542 130 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 PIGPP57054 158 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 RAP2BP61225 183 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 LY6G6FQ5SQ64 297 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 HCP5Q6MZN7 132 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 MRGPRDQ8TDS7 321 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 RTN4IP1Q8WWV3 396 aaPredicted RBP19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 TOMM40LQ969M1 308 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 SLC2A9Q9NRM0 540 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 DNAH9Q9NYC9 4486 aa19.45■□□□□ 0.7
CAPNS1-216ENST00000628306 TRAV39A0A0B4J263 110 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 F2RL2O00254 374 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 HSPA12AO43301 675 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 SLC22A5O76082 557 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 PI3P19957 117 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 CEACAM6P40199 344 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 LUMP51884 338 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 FXYD4P59646 89 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 ZFP69Q49AA0 526 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 LIN54Q6MZP7 749 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 CMTM1Q8IZ96 169 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 ZBTB34Q8NCN2 500 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 BVESQ8NE79 360 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 OR10V1Q8NGI7 309 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 OR5R1Q8NH85 324 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 IL1F10Q8WWZ1 152 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 ARL11Q969Q4 196 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 SLC5A7Q9GZV3 580 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 RANBP3Q9H6Z4 567 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 RDH8Q9NYR8 311 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 TAS2R3Q9NYW6 316 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 BTBD17A6NE02 478 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 ITGB1BP1O14713 200 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 SNAPC5O75971 98 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 S100GP29377 79 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 EDDM3AQ14507 147 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 C1orf122Q6ZSJ8 110 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 C5orf24Q7Z6I8 188 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 LRTM2Q8N967 370 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 OR10A7Q8NGE5 316 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 OR1L1Q8NH94 360 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 NAA60Q9H7X0 242 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 RAB18Q9NP72 206 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 PIPOXQ9P0Z9 390 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 JPT1Q9UK76 154 aa19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 UBE2J1Q9Y385 318 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-216ENST00000628306 COL7A1Q02388 2944 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 TRGV10A0A0A0MS01 117 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 PIGBOS1A0A0B4J2F0 54 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 TEX13DA0A0J9YY54 714 aaPredicted RBP19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 hADV38S2A0JD32 116 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 MPPED1O15442 326 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 NDUFB3O43676 98 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 RGS11O94810 467 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 EIF2B2P49770 351 aaKnown RBP19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 LRRC10Q5BKY1 277 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 BEND2Q8NDZ0 799 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 OR1A1Q9P1Q5 309 aa19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 SLC25A10Q9UBX3 287 aaPredicted RBP19.43■□□□□ 0.7
CAPNS1-216ENST00000628306 IGKV1D-13A0A0B4J2D9 117 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 KBTBD11-OT1A0A1B0GTJ5 212 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 ZNF729A6NN14 1252 aaPredicted RBP19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 YPEL1O60688 119 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 IGKV1-13P0DP09 117 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 UBE2E1P51965 193 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 EDDM3BP56851 147 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 NOXA1Q86UR1 476 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 TPRX1Q8N7U7 411 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 C11orf44Q8N8P7 122 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 OR52M1Q8NGK5 317 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 OR5M8Q8NGP6 311 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 YPEL2Q96QA6 119 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 LINC00312Q9Y6C7 94 aa19.42■□□□□ 0.7
CAPNS1-216ENST00000628306 H3BUX3 64 aa19.41■□□□□ 0.7
CAPNS1-216ENST00000628306 SECTM1Q8WVN6 248 aa19.41■□□□□ 0.7
CAPNS1-216ENST00000628306 HYLS1Q96M11 299 aa19.41■□□□□ 0.7
CAPNS1-216ENST00000628306 OR2S2Q9NQN1 319 aa19.41■□□□□ 0.7
CAPNS1-216ENST00000628306 CALYQ9NYX4 217 aa19.41■□□□□ 0.7
CAPNS1-216ENST00000628306 SRPXP78539 464 aa19.4■□□□□ 0.7
CAPNS1-216ENST00000628306 PRR18Q8N4B5 295 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms