RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 DYNLRB1Q9NP97 96 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 PARP11Q9NR21 331 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 PSENENQ9NZ42 101 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 WSB1Q9Y6I7 421 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 ARFGEF3Q5TH69 2177 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 NBASA2RRP1 2371 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 TMEM178BH3BS89 294 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 M0R1X1 148 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 FCN3O75636 299 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 MMP23AO75900 390 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 CD3EP07766 207 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 DANCRP0C864 163 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 ATP6V0CP27449 155 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 BLOC1S1P78537 153 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 LY6DQ14210 128 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 MIDNQ504T8 468 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 GFOD1Q9NXC2 390 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 COA4Q9NYJ1 87 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 AGPAT2O15120 278 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 NDUFB7P17568 137 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 FBXL19-AS1Q494R0 122 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 CT45A1Q5HYN5 189 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 IL34Q6ZMJ4 242 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 TMEM182Q6ZP80 229 aaPredicted RBP16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 CT45A3Q8NHU0 189 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 CACFD1Q9UGQ2 172 aa16.22■□□□□ 0.19
CHRNA4-209ENST00000627000 SIAH2O43255 324 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 NFYBP25208 207 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 SULT1A1P50225 295 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 ARL16Q0P5N6 197 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 STX12Q86Y82 276 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 TCTEX1D1Q8N7M0 179 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 LRRC46Q96FV0 321 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 RBKSQ9H477 322 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 FAM96BQ9Y3D0 163 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 PPIAL4EA0A075B759 164 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 TRAV38-1A0A0B4J264 116 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 PPIAL4DF5H284 164 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 DLL1O00548 723 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 FCGR3BO75015 233 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 METTL15P1P0C7V9 234 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 PPIAL4FP0DN26 164 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 ERVFRD-1P60508 538 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 UBE2KP61086 200 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 TNFRSF9Q07011 255 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 ABHD14AQ9BUJ0 271 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 TMEM106BQ9NUM4 274 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 NDRG3Q9UGV2 375 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 PPIAL4AQ9Y536 164 aa16.21■□□□□ 0.19
CHRNA4-209ENST00000627000 COL6A6A6NMZ7 2263 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 NKX6-3A6NJ46 265 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 DNASE2O00115 360 aaPredicted RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 APOBEC3AP31941 199 aaPredicted RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 RUNX1Q01196 453 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 DEFA5Q01523 94 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 ATRAIDQ6UW56 229 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 HAPLN4Q86UW8 402 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 NKX6-2Q9C056 277 aaPredicted RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 HCFC1P51610 2035 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 DOCK11Q5JSL3 2073 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 TMEM218A2RU14 115 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 NUDT19A8MXV4 375 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 NUPL2O15504 423 aaKnown RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 F2RL1P55085 397 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNF616Q08AN1 781 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 SPANXN5Q5MJ07 72 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 PRAMEF5Q5TYX0 476 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 LYPD2Q6UXB3 125 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 H2BFWTQ7Z2G1 175 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 ZCCHC14Q8WYQ9 949 aaKnown RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 ATP5SQ99766 215 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 IDI2-AS1Q9NZ38 188 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 SLC25A10Q9UBX3 287 aaPredicted RBP16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 HSPB7Q9UBY9 170 aa16.2■□□□□ 0.18
CHRNA4-209ENST00000627000 MARCH11A6NNE9 402 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 RAB29O14966 203 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 PRH1P02810 166 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 ADCYAP1P18509 176 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 CAMLGP49069 296 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 LINC00518Q8N0U6 118 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 C1orf87Q8N0U7 546 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 OR2G3Q8NGZ4 309 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 LYPD6BQ8NI32 183 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 R3HDM4Q96D70 268 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 RBMXL1Q96E39 390 aaKnown RBP16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 TREM1Q9NP99 234 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 C19orf12Q9NSK7 152 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 CISD1Q9NZ45 108 aaKnown RBP16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNF729A6NN14 1252 aaPredicted RBP16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 ATG12O94817 140 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 GNG10P50151 68 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 UNQ6494/PRO21346Q6UXR6 183 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 CORO2AQ92828 525 aa16.19■□□□□ 0.18
CHRNA4-209ENST00000627000 SPINK9Q5DT21 86 aa16.18■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNF439Q8NDP4 499 aa16.18■□□□□ 0.18
CHRNA4-209ENST00000627000 MS4A5Q9H3V2 200 aa16.18■□□□□ 0.18
CHRNA4-209ENST00000627000 RAB9BQ9NP90 201 aa16.18■□□□□ 0.18
CHRNA4-209ENST00000627000 SAA2-SAA4A0A096LPE2 208 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms