RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RRASP10301 218 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 ZNF182P17025 639 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-208ENST00000626828 THBS3P49746 956 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 TAS2R20P59543 309 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 CBX3Q13185 183 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 ZNF660Q6AZW8 331 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-208ENST00000626828 AP3S1Q92572 193 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 OR51J1Q9H342 316 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 NOTCH1P46531 2555 aa13.18□□□□□ -0.3
UBE3D-208ENST00000626828 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 TUSC2O75896 110 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 IGKV1-16P04430 117 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 PTHLHP12272 177 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 VDAC1P21796 283 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 PRSS3P35030 304 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 RPL5P46777 297 aaKnown RBP13.17□□□□□ -0.3
UBE3D-208ENST00000626828 PLGLAQ15195 96 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 PSG5Q15238 335 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 ZNF645Q8N7E2 425 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 NECAP2Q9NVZ3 263 aa13.17□□□□□ -0.3
UBE3D-208ENST00000626828 IGHV7-81A0A0B4J1V7 117 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 SPDEFO95238 335 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
UBE3D-208ENST00000626828 ELANEP08246 267 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 DUTP33316 252 aaKnown RBP13.16□□□□□ -0.3
UBE3D-208ENST00000626828 RTL8BQ17RB0 113 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 BVESQ8NE79 360 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 OR5AP2Q8NGF4 316 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
UBE3D-208ENST00000626828 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
UBE3D-208ENST00000626828 TNCP24821 2201 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 FCN1O00602 326 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 PF4V1P10720 104 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 ELK1P19419 428 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 SLC6A1P30531 599 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 FCGR2CP31995 323 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 CX3CL1P78423 397 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 FOXE3Q13461 319 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 CXorf66Q5JRM2 361 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-208ENST00000626828 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 CLVS1Q8IUQ0 354 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-208ENST00000626828 GIMAP1Q8WWP7 306 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
UBE3D-208ENST00000626828 METTL1Q9UBP6 276 aaKnown RBP13.15□□□□□ -0.3
UBE3D-208ENST00000626828 RBMX2Q9Y388 322 aaKnown RBP13.15□□□□□ -0.3
UBE3D-208ENST00000626828 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 HPGDSO60760 199 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 IGHG4P01861 327 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 FCER2P06734 321 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 NAT1P18440 290 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 TMBIM6P55061 237 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
UBE3D-208ENST00000626828 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
UBE3D-208ENST00000626828 CDK10Q15131 360 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 RAB2BQ8WUD1 216 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 DDB2Q92466 427 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 BCL7BQ9BQE9 202 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 PARP11Q9NR21 331 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 PRELID3BQ9Y3B1 194 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 WSB1Q9Y6I7 421 aa13.14□□□□□ -0.31
UBE3D-208ENST00000626828 TRAV41A0A0B4J266 112 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 IGKV1D-13A0A0B4J2D9 117 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 LINC00473A8K010 186 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 FAM25AB3EWG3 89 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 FAM25CB3EWG5 89 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 FAM25GB3EWG6 89 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 SHOXO15266 292 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 IGKV1-13P0DP09 117 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 PPIFP30405 207 aaKnown RBP13.13□□□□□ -0.31
UBE3D-208ENST00000626828 CFHR3Q02985 330 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 MSMO1Q15800 293 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 RNF152Q8N8N0 203 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 ZBTB34Q8NCN2 500 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 WFDC9Q8NEX5 89 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 CLCC1Q96S66 551 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 HSD17B10Q99714 261 aaKnown RBP13.13□□□□□ -0.31
UBE3D-208ENST00000626828 SCPEP1Q9HB40 452 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 CMYA5Q8N3K9 4069 aa13.13□□□□□ -0.31
UBE3D-208ENST00000626828 G3V318 75 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 SULT1C2O00338 296 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 SLC25A17O43808 307 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 TPPPO94811 219 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 PPYP01298 95 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 AADACP22760 399 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-208ENST00000626828 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-208ENST00000626828 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 OVCH2Q7RTZ1 564 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
UBE3D-208ENST00000626828 ZNF695Q8IW36 515 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms