RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MINOS1-NBL1R4GNA1 71 aa10.19□□□□□ -0.78
PNKP-217ENST00000625216 ZBTB25P24278 435 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 CEACAM6P40199 344 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 DYNLT3P51808 116 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 PPP1R1AQ13522 171 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 LY6EQ16553 131 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 LHFPL4Q7Z7J7 247 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 OR4C13Q8NGP0 309 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 SECTM1Q8WVN6 248 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 ALX4Q9H161 411 aaPredicted RBP10.18□□□□□ -0.78
PNKP-217ENST00000625216 TMEM133Q9H2Q1 129 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 OR2S2Q9NQN1 319 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 IDI2-AS1Q9NZ38 188 aa10.18□□□□□ -0.78
PNKP-217ENST00000625216 IGHV2-26A0A0B4J1V2 119 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 OR4E1P0C645 316 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 CBX3Q13185 183 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 SSX2Q16385 188 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 HEPN1Q6WQI6 88 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 SLC38A6Q8IZM9 456 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 OR2T6Q8NHC8 308 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 C5orf30Q96GV9 206 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 SCGB3A2Q96PL1 93 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 CCL28Q9NRJ3 127 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 GFOD1Q9NXC2 390 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 C14orf166Q9Y224 244 aaKnown RBP10.17□□□□□ -0.78
PNKP-217ENST00000625216 TCF19Q9Y242 345 aa10.17□□□□□ -0.78
PNKP-217ENST00000625216 HSD17B6O14756 317 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 SLC31A2O15432 143 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 YPEL1O60688 119 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 AKR1C4P17516 323 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 PAX6P26367 422 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 HTR1DP28221 377 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 GNRHRP30968 328 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 LUMP51884 338 aaPredicted RBP10.16□□□□□ -0.78
PNKP-217ENST00000625216 TAS2R31P59538 309 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 SUPT4H1P63272 117 aaKnown RBP10.16□□□□□ -0.78
PNKP-217ENST00000625216 DHODHQ02127 395 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 TMEM30BQ3MIR4 351 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 MORN2Q502X0 79 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 PHLDA2Q53GA4 152 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 ZNF818PQ6ZRF7 136 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 DYNAPQ8N1N2 210 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 ABHD12Q8N2K0 398 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 ZFAND1Q8TCF1 268 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 CHAC2Q8WUX2 184 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 LEAP2Q969E1 77 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 YPEL2Q96QA6 119 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 OR51J1Q9H342 316 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 RAB9BQ9NP90 201 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 SLC2A9Q9NRM0 540 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 GNG12Q9UBI6 72 aa10.16□□□□□ -0.78
PNKP-217ENST00000625216 C9orf170A2RU37 121 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 A6NDX4 124 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 CRYM-AS1A6NIL9 109 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 GPR31O00270 319 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 ST8SIA5O15466 376 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 IGLV2-14P01704 120 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 IGHV3-7P01780 117 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 HLA-AP01891 365 aaKnown RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 OR8U9P0C7N5 309 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 CD34P28906 385 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 PIGPP57054 158 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 UBE2MP61081 183 aaKnown RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 RND3P61587 244 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 RRAS2P62070 204 aaPredicted RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 DHRS2Q13268 280 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 LDLRAD2Q5SZI1 272 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 LYG2Q86SG7 212 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 ZNF439Q8NDP4 499 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 OR52M1Q8NGK5 317 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 OR8U1Q8NH10 309 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 ZNF431Q8TF32 576 aaPredicted RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 ZNF486Q96H40 463 aaPredicted RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 GPHA2Q96T91 129 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 OR2D2Q9H210 308 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 IFI27L2Q9H2X8 130 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 GPN1Q9HCN4 374 aaPredicted RBP10.15□□□□□ -0.78
PNKP-217ENST00000625216 DPM3Q9P2X0 92 aa10.15□□□□□ -0.78
PNKP-217ENST00000625216 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.79
PNKP-217ENST00000625216 HMX3A6NHT5 357 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 SNRPGP15A8MWD9 76 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 CREBL2O60519 120 aaPredicted RBP10.14□□□□□ -0.79
PNKP-217ENST00000625216 SFT2D2O95562 160 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 VAMP1P23763 118 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 NFYBP25208 207 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 RAB13P51153 203 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 ARHGDIBP52566 201 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 ZNF134P52741 427 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 FCN2Q15485 313 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 ABCA11PQ4W5N1 156 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 TMEM128Q5BJH2 165 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 Q8N2B8 174 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms