RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 OR51B2Q9Y5P1 312 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 MED12Q93074 2177 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ABCA1O95477 2261 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 CNOT1A5YKK6 2376 aaKnown RBP4.84□□□□□ -1.63
ERCC6-213ENST00000624341 DNPH1O43598 174 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 HPRT1P00492 218 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 PRRX1P54821 245 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 COL4A6Q14031 1691 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 UBALD2Q8IYN6 164 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 OR1L8Q8NGR8 309 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 PERPQ96FX8 193 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 UQCR10Q9UDW1 63 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 OR2T8A6NH00 312 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 PPIHO43447 177 aaKnown RBP4.84□□□□□ -1.63
ERCC6-213ENST00000624341 MT-ND6P03923 174 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 CD82P27701 267 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 PRDX2P32119 198 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 PRNTQ86SH4 94 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 LINC00596Q86U02 117 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 RASL11BQ9BPW5 248 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 TMEM208Q9BTX3 173 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 DLL3Q9NYJ7 618 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 THYN1Q9P016 225 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ZDHHC8Q9ULC8 765 aa4.84□□□□□ -1.63
ERCC6-213ENST00000624341 ARHGEF17Q96PE2 2063 aaPredicted RBP4.84□□□□□ -1.64
ERCC6-213ENST00000624341 C5orf52A6NGY3 159 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 SRIP30626 198 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 PSMB2P49721 201 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 SRSF9Q13242 221 aaKnown RBP eCLIP4.84□□□□□ -1.64
ERCC6-213ENST00000624341 GLRX5Q86SX6 157 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 SGK494Q96LW2 274 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 NUDT16L1Q9BRJ7 211 aaKnown RBP4.84□□□□□ -1.64
ERCC6-213ENST00000624341 AICDAQ9GZX7 198 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 RNF7Q9UBF6 113 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 IGKV3-7A0A075B6H7 116 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 IGKV1D-43A0A0B4J1Z2 117 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 GAGE10A6NGK3 116 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 KLK10O43240 276 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 RAMP1O60894 148 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 KBTBD11O94819 623 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 RTP5Q14D33 572 aa4.84□□□□□ -1.64
ERCC6-213ENST00000624341 QTRT1Q9BXR0 403 aaKnown RBP4.84□□□□□ -1.64
ERCC6-213ENST00000624341 PARD6GQ9BYG4 376 aaPredicted RBP4.84□□□□□ -1.64
ERCC6-213ENST00000624341 OR4C46A6NHA9 309 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 A8MWL6 223 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 PATE3B3GLJ2 98 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ADAM11O75078 769 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 TBX6O95947 436 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CRYABP02511 175 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ARL14EPLP0DKL9 152 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CBLN1P23435 193 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CRYBB3P26998 211 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SSTR5P35346 364 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 TNFRSF9Q07011 255 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 LY6G6FQ5SQ64 297 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 BIVMQ86UB2 503 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ST6GALNAC3Q8NDV1 305 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 STXBP6Q8NFX7 210 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RCC1LQ96I51 464 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ROS1P08922 2347 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CA2P00918 260 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 LINC00869P0C866 280 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 CTAG1AP78358 180 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ASPHD2Q6ICH7 369 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 BHLHA15Q7RTS1 189 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM183AQ8IXX5 376 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SPSB2Q99619 263 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RTBDNQ9BSG5 229 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 MRPL37Q9BZE1 423 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 WIPI2Q9Y4P8 454 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 INSIG2Q9Y5U4 225 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 KIF26BQ2KJY2 2108 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 MPDU1O75352 247 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 OR4A8P0C604 315 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RPL30P62888 115 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF506Q5JVG8 444 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ABHD12Q8N2K0 398 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 EIF4E3Q8N5X7 224 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 LINC00469Q8N7U9 141 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 GMPPAQ96IJ6 420 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SMIM8Q96KF7 97 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RNF126Q9BV68 326 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 POLEQ07864 2286 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 BPTFQ12830 3046 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 GBF1Q92538 1859 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 COL4A4P53420 1690 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF729A6NN14 1252 aaPredicted RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM229AB2RXF0 380 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 S1PR2O95136 353 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SRP19P09132 144 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 SFTPCP11686 197 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 KRTCAP3Q53RY4 240 aa4.83□□□□□ -1.64
ERCC6-213ENST00000624341 RBM14Q96PK6 669 aaKnown RBP4.83□□□□□ -1.64
ERCC6-213ENST00000624341 HEXA-AS1Q9H8Q6 139 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms