RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 C1orf174Q8IYL3 243 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 OR1L1Q8NH94 360 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 FGF21Q9NSA1 209 aa12.85□□□□□ -0.35
PMS1-221ENST00000624204 hCG_38984A0A1B0GV85 526 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 LILRA5A6NI73 299 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 LINC00205P59089 165 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 SSPNQ14714 243 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
PMS1-221ENST00000624204 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TMEM42Q69YG0 159 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 ZNF738Q8NE65 137 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 OR10P1Q8NGE3 313 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 ORAOV1Q8WV07 137 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 FREM1Q5H8C1 2179 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 A0A1W2PPV4 95 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 OR6C6A6NF89 314 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TNFSF11O14788 317 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 IGHEP01854 428 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 SLC25A6P12236 298 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 PTGDSP41222 190 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 CDKN1BP46527 198 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 YPEL3P61236 119 aaPredicted RBP12.84□□□□□ -0.35
PMS1-221ENST00000624204 SLC23A3Q6PIS1 610 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TRBV20OR9-2A0A075B6H5 130 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 PDE6DO43924 150 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 CD99P14209 185 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 CLDN15P56746 228 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 PSG4Q00888 419 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 VAMP3Q15836 100 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 KRTCAP3Q53RY4 240 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
PMS1-221ENST00000624204 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
PMS1-221ENST00000624204 CACNA1EQ15878 2313 aa12.83□□□□□ -0.35
PMS1-221ENST00000624204 TRAPPC2LH3BP13 241 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 PIAS2O75928 621 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 OR56B2PQ8NGI1 322 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.36
PMS1-221ENST00000624204 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 LCN12Q6JVE5 192 aa12.83□□□□□ -0.36
PMS1-221ENST00000624204 APOBEC3DQ96AK3 386 aaPredicted RBP12.83□□□□□ -0.36
PMS1-221ENST00000624204 GDF9O60383 454 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 HTD2P86397 168 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 ZNF324BQ6AW86 544 aaPredicted RBP12.82□□□□□ -0.36
PMS1-221ENST00000624204 FGFRL1Q8N441 504 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 PRR14LQ5THK1 2151 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 DSPP15924 2871 aaKnown RBP12.82□□□□□ -0.36
PMS1-221ENST00000624204 ZIC3O60481 467 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 HOXA4Q00056 320 aaPredicted RBP12.82□□□□□ -0.36
PMS1-221ENST00000624204 MKXQ8IYA7 352 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 SAXO1Q8IYX7 474 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 SERTAD4Q9NUC0 356 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 ROS1P08922 2347 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 SCO2A0A1W2PP80 73 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 GPX1P07203 203 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 BPIFB3P59826 476 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 HLA-DRB5Q30154 266 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 UBE2ZQ9H832 354 aaPredicted RBP12.82□□□□□ -0.36
PMS1-221ENST00000624204 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 LRP4O75096 1905 aa12.82□□□□□ -0.36
PMS1-221ENST00000624204 CEP250Q9BV73 2442 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 NXPH2O95156 264 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 TIMP3P35625 211 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 FGF12P61328 243 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
PMS1-221ENST00000624204 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 G6PCP35575 357 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 SRYQ05066 204 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 Q6ZS49 121 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 YRDCQ86U90 279 aaKnown RBP12.81□□□□□ -0.36
PMS1-221ENST00000624204 NFAM1Q8NET5 270 aaPredicted RBP12.81□□□□□ -0.36
PMS1-221ENST00000624204 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
PMS1-221ENST00000624204 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 COX11Q9Y6N1 276 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 TMPRSS2O15393 492 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 SYNGR1O43759 233 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms