RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GOSR1O95249 250 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 TFF3Q07654 80 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 LTC4SQ16873 150 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 SLC25A48Q6ZT89 311 aaKnown RBP13.5□□□□□ -0.25
LDB3-208ENST00000623007 ZNF439Q8NDP4 499 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 OR5C1Q8NGR4 320 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 TSNAXQ99598 290 aaKnown RBP13.5□□□□□ -0.25
LDB3-208ENST00000623007 PARD6GQ9BYG4 376 aaPredicted RBP13.5□□□□□ -0.25
LDB3-208ENST00000623007 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 RP1L1Q8IWN7 2480 aaPredicted RBP13.5□□□□□ -0.25
LDB3-208ENST00000623007 DSCAMO60469 2012 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 S1PR2O95136 353 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 ZNF816Q0VGE8 651 aaPredicted RBP13.5□□□□□ -0.25
LDB3-208ENST00000623007 ATP6V1FQ16864 119 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 BTNL3Q6UXE8 466 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 DPPA3Q6W0C5 159 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 Q6ZRM9 215 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 R3HDM4Q96D70 268 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 C5orf30Q96GV9 206 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 DSCAML1Q8TD84 2053 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 LINC00473A8K010 186 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 HRASP01112 189 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 DANCRP0C864 163 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 SELLP14151 372 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 G6PCP35575 357 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 PAX9P55771 341 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 TIMD4Q96H15 378 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 NUP50Q9UKX7 468 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 PLCE1Q9P212 2302 aa13.49□□□□□ -0.25
LDB3-208ENST00000623007 RAI1Q7Z5J4 1906 aaPredicted RBP13.48□□□□□ -0.25
LDB3-208ENST00000623007 FCGR3BO75015 233 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 FBXO24O75426 580 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 RBP4P02753 201 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 OR8U8P0C7N1 319 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 NFYBP25208 207 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
LDB3-208ENST00000623007 RTL8BQ17RB0 113 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
LDB3-208ENST00000623007 TCF23Q7RTU1 214 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 ZCCHC24Q8N2G6 241 aaKnown RBP13.48□□□□□ -0.25
LDB3-208ENST00000623007 LINC00311Q8N616 119 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 LFNGQ8NES3 379 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 DDB2Q92466 427 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 TNFRSF14Q92956 283 aa13.48□□□□□ -0.25
LDB3-208ENST00000623007 PINX1Q96BK5 328 aaKnown RBP13.48□□□□□ -0.25
LDB3-208ENST00000623007 SAA2-SAA4A0A096LPE2 208 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 RBMXL2O75526 392 aaKnown RBP13.47□□□□□ -0.25
LDB3-208ENST00000623007 SAA2P0DJI9 122 aaPredicted RBP13.47□□□□□ -0.25
LDB3-208ENST00000623007 OMGP23515 440 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 DYNLT3P51808 116 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 ZNF134P52741 427 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 PJVKQ0ZLH3 352 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 NCR3LG1Q68D85 454 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 ZNF429Q86V71 674 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 LYG1Q8N1E2 194 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 LYPD6BQ8NI32 183 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 ZNF596Q8TC21 504 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 SCGB1C1Q8TD33 95 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 MAP1BP46821 2468 aaKnown RBP13.47□□□□□ -0.25
LDB3-208ENST00000623007 LAMA5O15230 3695 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 A0A087X0M5 115 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 A0A1B0GX30 115 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 hCG_1809904A0A1W2PP81 198 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 A0A1W2PPE2 198 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 A0A1W2PR64 198 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 A0A1W2PRV1 198 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 BTBD17A6NE02 478 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 DVL1O14640 695 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 TMEM50AO95807 157 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 IL3RAP26951 378 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 SPCS3P61009 180 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 OR2B11Q5JQS5 317 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 PXDC1Q5TGL8 231 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 SLC25A24Q6NUK1 477 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 PUSL1Q8N0Z8 303 aaKnown RBP13.47□□□□□ -0.25
LDB3-208ENST00000623007 WFDC1Q9HC57 220 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 DCAF16Q9NXF7 216 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
LDB3-208ENST00000623007 SOX15O60248 233 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 PLAUP00749 431 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.26
LDB3-208ENST00000623007 RAB2AP61019 212 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 CACNA1DQ01668 2161 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 TMEM155Q4W5P6 130 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 PRAMEF5Q5TYX0 476 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 TMEM200BQ69YZ2 307 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 TMEM14EPQ6UXP3 125 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 DTD1Q8TEA8 209 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 H1FXQ92522 213 aaKnown RBP13.46□□□□□ -0.26
LDB3-208ENST00000623007 RAB1CQ92928 201 aa13.46□□□□□ -0.26
LDB3-208ENST00000623007 PSMG3Q9BT73 122 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms