RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 RAP1AP62834 184 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 EMX2Q04743 252 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 HTR4Q13639 388 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 RHEBQ15382 184 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 LTC4SQ16873 150 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF876PQ49A33 203 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF497Q6ZNH5 498 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 RNF165Q6ZSG1 346 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF584Q8IVC4 421 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 TMEM86AQ8N2M4 240 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 YIPF7Q8N8F6 280 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 NUP35Q8NFH5 326 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 NPBQ8NG41 125 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 VSIG2Q96IQ7 327 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 C20orf27Q9GZN8 174 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 CDC42EP4Q9H3Q1 356 aaKnown RBP3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 CACNG5Q9UF02 275 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 SLC23A2Q9UGH3 650 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 RBM7Q9Y580 266 aaKnown RBP3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 CD109Q6YHK3 1445 aa3.92□□□□□ -1.78
RNU6-538P-201ENST00000622329 TMEM72A0PK05 275 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 C9orf170A2RU37 121 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 TXNDC9O14530 226 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 TNFSF15O95150 251 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 IGLV2-8P01709 118 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 RPL7P18124 248 aaKnown RBP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 RPS3P23396 243 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 LHX2P50458 406 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 RPL36AP83881 106 aaKnown RBP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 GNA12Q03113 381 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 TIMM50Q3ZCQ8 353 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 LYPD2Q6UXB3 125 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF429Q86V71 674 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 MS4A6EQ96DS6 147 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 ABHD14BQ96IU4 210 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 C18orf15Q96N68 181 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF382Q96SR6 550 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 MED28Q9H204 178 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 HEXA-AS1Q9H8Q6 139 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF556Q9HAH1 456 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 COA4Q9NYJ1 87 aa3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 BAZ2AQ9UIF9 1905 aaKnown RBP3.91□□□□□ -1.78
RNU6-538P-201ENST00000622329 SSH2Q76I76 1423 aa3.9□□□□□ -1.78
RNU6-538P-201ENST00000622329 TRBV19A0A075B6N1 114 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 IGKV6D-21A0A0A0MT36 114 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 B4DEV8 164 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 C4orf51C9J302 202 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 K7ERU9 68 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 M0R381 172 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 GSTZ1O43708 216 aaPredicted RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 IFNA7P01567 189 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 TSPAN19P0C672 248 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 ATP5G3P48201 142 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 POLR2HP52434 150 aaKnown RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 PSG9Q00887 426 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 ELOCQ15369 112 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 CST6Q15828 149 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 MORN2Q502X0 79 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 LRP11Q86VZ4 500 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 EXOC3-AS1Q8N2X6 119 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 C12orf45Q8N5I9 185 aaPredicted RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 LINC01555Q8NAE3 123 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 ZNF555Q8NEP9 628 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 OR2M3Q8NG83 312 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 ADAT3Q96EY9 351 aaPredicted RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 PDXPQ96GD0 296 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 THTPAQ9BU02 230 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 PDFQ9HBH1 243 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 POPDC3Q9HBV1 291 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 GPR84Q9NQS5 396 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 KCNIP2Q9NS61 270 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 RPS6KB2Q9UBS0 482 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 PRSS21Q9Y6M0 314 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 U3KQ87 197 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 DENND4BO75064 1496 aaPredicted RBP3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 SCN5AQ14524 2016 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 DYSFO75923 2080 aa3.9□□□□□ -1.79
RNU6-538P-201ENST00000622329 MED23Q9ULK4 1368 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 OVOS2A0A0J9YW53 1432 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ATRNO75882 1429 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 NOS1P29475 1434 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 OVOS2Q6IE36 1432 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 PDS5BQ9NTI5 1447 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ZNF354AO60765 605 aaPredicted RBP3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 BANF1O75531 89 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ZNF432O94892 652 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 HLA-DQB2P05538 268 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ZNF806P0C7X5 589 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 NPY1RP25929 384 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 PPP1CCP36873 323 aaKnown RBP3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 WNT4P56705 351 aa3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 ELF3P78545 371 aaPredicted RBP3.89□□□□□ -1.79
RNU6-538P-201ENST00000622329 GRK1Q15835 563 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms