RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 MFSD8Q8NHS3 518 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 LHFPL5Q8TAF8 219 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 LMX1AQ8TE12 382 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 PACRGQ96M98 296 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 C1QTNF6Q9BXI9 259 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 PARD6GQ9BYG4 376 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 EIF5A2Q9GZV4 153 aaKnown RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 MIA2Q96PC5 1412 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 CECR2Q9BXF3 1484 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 PRR14LQ5THK1 2151 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 TP53I11O14683 189 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 STK16O75716 305 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 IGLV3-27P01718 113 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 IFNA6P05013 189 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 ATP5G1P05496 136 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 CRHP06850 196 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 FABP1P07148 127 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 OR4A8P0C604 315 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 IGHV3-30-3P0DP02 117 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 OPRM1P35372 400 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 PPP1CCP36873 323 aaKnown RBP2.32□□□□□ -2.04
CPNE3-213ENST00000622183 CAPZBP47756 277 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 FGF12P61328 243 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 ERVS71-1P61550 626 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 STX5Q13190 355 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 UAP1Q16222 522 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-213ENST00000622183 SLC36A2Q495M3 483 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 SPIN4Q56A73 249 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 ACSBG2Q5FVE4 666 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 COQ5Q5HYK3 327 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 SMARCD3Q6STE5 483 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 C12orf29Q8N999 325 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 OR2V1Q8NHB1 315 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 SLC37A2Q8TED4 501 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 DYDC1Q8WWB3 177 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 TMBIM1Q969X1 311 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 KCTD7Q96MP8 289 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 PRRT1Q99946 306 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 OR51B6Q9H340 312 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
CPNE3-213ENST00000622183 SMPXQ9UHP9 88 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 DNAJC12Q9UKB3 198 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 ZNF337Q9Y3M9 751 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 NAV1Q8NEY1 1877 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 CPSF1Q10570 1443 aaKnown RBP2.32□□□□□ -2.04
CPNE3-213ENST00000622183 FAM135BQ49AJ0 1406 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 CACNA1DQ01668 2161 aa2.32□□□□□ -2.04
CPNE3-213ENST00000622183 LOC102725191A0A1B0GVB3 256 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 LRRN3E7EW58 273 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 G3V3Q6 166 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 LYPLA2O95372 231 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 CRYGDP07320 174 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 CTSGP08311 255 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 SLC35A2P78381 396 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 REEP5Q00765 189 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
CPNE3-213ENST00000622183 MRPL51Q4U2R6 128 aaKnown RBP2.31□□□□□ -2.04
CPNE3-213ENST00000622183 SDIM1Q6ZPB5 146 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 ATP5L2Q7Z4Y8 100 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 MSRB3Q8IXL7 192 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 TMEM156Q8N614 296 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 OR2D3Q8NGH3 330 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 GPR119Q8TDV5 335 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 ASB13Q8WXK3 278 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 CMTM6Q9NX76 183 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 V9GYQ6 96 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 RFX7Q2KHR2 1363 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 RTL9Q8NET4 1388 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 CEP162Q5TB80 1403 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 SPEF2Q9C093 1822 aa2.31□□□□□ -2.04
CPNE3-213ENST00000622183 LINC00862A6NCI5 91 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 C17orf98A8MV24 154 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 C2orf74A8MZ97 194 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 TMEM238C9JI98 176 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 FADS1O60427 444 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 DEDDO75618 318 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 PSMG1O95456 288 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 APOC1P02654 83 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 NQO1P15559 274 aaKnown RBP2.3□□□□□ -2.04
CPNE3-213ENST00000622183 HSD11B1P28845 292 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 GNG10P50151 68 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 CXCR4P61073 352 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 HERVK_113P63121 156 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 HPCAP84074 193 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 TMEM267Q0VDI3 215 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-213ENST00000622183 IMPG1Q17R60 797 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 PHF13Q86YI8 300 aaPredicted RBP2.3□□□□□ -2.04
CPNE3-213ENST00000622183 Q8N402 240 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 MBOAT7Q96N66 472 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 UPK3BQ9BT76 320 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 TIPINQ9BVW5 301 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 FAIMQ9NVQ4 179 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 USE1Q9NZ43 259 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 ALG5Q9Y673 324 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 VPS8Q8N3P4 1428 aa2.3□□□□□ -2.04
CPNE3-213ENST00000622183 TTC37Q6PGP7 1564 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms