RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM215AQ9Y5M1 114 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 LHBP01229 141 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 TAGLN2P37802 199 aaKnown RBP7.85□□□□□ -1.15
PDPN-212ENST00000621990 PDLIM3Q53GG5 364 aaPredicted RBP7.85□□□□□ -1.15
PDPN-212ENST00000621990 ZNF474Q6S9Z5 364 aaPredicted RBP7.85□□□□□ -1.15
PDPN-212ENST00000621990 GCSAMQ8N6F7 178 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 DTD1Q8TEA8 209 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 SNX22Q96L94 193 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 C12orf57Q99622 126 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 TMEM242Q9NWH2 141 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 CLN8Q9UBY8 286 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 VAX2Q9UIW0 290 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 WASF3Q9UPY6 502 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 IGLV3-9A0A075B6K5 115 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 A0A1W2PPE3 182 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MARCH11A6NNE9 402 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 F2RL2O00254 374 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MGST3O14880 152 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 ST8SIA5O15466 376 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 YPEL1O60688 119 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 PROP1O75360 226 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDPN-212ENST00000621990 IGKV1D-33P01593 117 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 IGKV1-33P01594 117 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MEOX2P50222 304 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 LOXL3P58215 753 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 GNB2P62879 340 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 PNRC1Q12796 327 aaPredicted RBP7.84□□□□□ -1.15
PDPN-212ENST00000621990 LCN15Q6UWW0 184 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 Q6ZS92 163 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 H2BFWTQ7Z2G1 175 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 LRP11Q86VZ4 500 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 RPP25LQ8N5L8 163 aaKnown RBP7.84□□□□□ -1.15
PDPN-212ENST00000621990 YPEL2Q96QA6 119 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 PSG11Q9UQ72 335 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 BSNQ9UPA5 3926 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 RBFOX2O43251 390 aaKnown RBP eCLIP7.84□□□□□ -1.15
PDPN-212ENST00000621990 ZG16O60844 167 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 LY86O95711 162 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 DUTP33316 252 aaKnown RBP7.84□□□□□ -1.15
PDPN-212ENST00000621990 GLRXP35754 106 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 GATA4P43694 442 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 ELOBQ15370 118 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 Q3ZCU0 254 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MORN2Q502X0 79 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 S100PBPQ96BU1 408 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 DCTN5Q9BTE1 182 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
PDPN-212ENST00000621990 IGHV3-43A0A0B4J1X8 118 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ZFP92A6NM28 416 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ZNF727A8MUV8 499 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ITGB1BP1O14713 200 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 MBP02144 154 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 CD55P08174 381 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 CGB3P0DN86 165 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 CGB7P0DN87 165 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 IGHV3-43DP0DP04 118 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 TIMP3P35625 211 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 RTP5Q14D33 572 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ADAM5Q6NVV9 412 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ACSM6Q6P461 480 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 OR10P1Q8NGE3 313 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 RFESDQ8TAC1 157 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ZDHHC16Q969W1 377 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 MEGF10Q96KG7 1140 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 GAB2Q9UQC2 676 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 CACNA1DQ01668 2161 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 EP300Q09472 2414 aaPredicted RBP7.83□□□□□ -1.16
PDPN-212ENST00000621990 HEATR1Q9H583 2144 aaKnown RBP7.83□□□□□ -1.16
PDPN-212ENST00000621990 IFNA1P01562 189 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 S100A8P05109 93 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 S100A6P06703 90 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 ZNF83P51522 516 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 FGF8P55075 233 aaPredicted RBP7.83□□□□□ -1.16
PDPN-212ENST00000621990 RAB11AP62491 216 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 NCR3LG1Q68D85 454 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 PPP1R35Q8TAP8 253 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 Q8WTZ3 238 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 FAM222BQ8WU58 562 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 OR2V2Q96R30 315 aa7.83□□□□□ -1.16
PDPN-212ENST00000621990 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 HPRT1P00492 218 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 IFNA17P01571 189 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 SMIM6P0DI80 62 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 GPR12P47775 334 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 CEBPGP53567 150 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 ELLP55199 621 aaPredicted RBP7.82□□□□□ -1.16
PDPN-212ENST00000621990 KLF3P57682 345 aaPredicted RBP7.82□□□□□ -1.16
PDPN-212ENST00000621990 LINC00205P59089 165 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 EDDM3AQ14507 147 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 C1orf185Q5T7R7 199 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 OR52E5Q8NH55 327 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 NPCDR1Q9BY65 106 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 IFI27L2Q9H2X8 130 aa7.82□□□□□ -1.16
PDPN-212ENST00000621990 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms