RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ODF3L1Q8IXM7 274 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 S1PR3Q99500 378 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 DOCK11Q5JSL3 2073 aa17.6■□□□□ 0.41
SPAST-204ENST00000621856 GPR137BO60478 399 aa17.6■□□□□ 0.41
SPAST-204ENST00000621856 F12P00748 615 aaPredicted RBP17.6■□□□□ 0.41
SPAST-204ENST00000621856 KIR2DS2P43631 304 aa17.6■□□□□ 0.41
SPAST-204ENST00000621856 THBS3P49746 956 aa17.6■□□□□ 0.41
SPAST-204ENST00000621856 C1orf229Q6ZS94 237 aaPredicted RBP17.6■□□□□ 0.41
SPAST-204ENST00000621856 LRBAP50851 2863 aa17.6■□□□□ 0.41
SPAST-204ENST00000621856 ZFYVE26Q68DK2 2539 aa17.59■□□□□ 0.41
SPAST-204ENST00000621856 NDUFS7O75251 213 aa17.59■□□□□ 0.41
SPAST-204ENST00000621856 WDR25Q64LD2 544 aaPredicted RBP17.59■□□□□ 0.41
SPAST-204ENST00000621856 ITGB1BP2Q9UKP3 347 aa17.59■□□□□ 0.41
SPAST-204ENST00000621856 A0A1W2PPH5 198 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 GPR6P46095 362 aaPredicted RBP17.58■□□□□ 0.41
SPAST-204ENST00000621856 EFNA4P52798 201 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 RAB14P61106 215 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 GPR157Q5UAW9 335 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 SCARB1Q8WTV0 552 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 ADTRPQ96IZ2 230 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 ZNF251Q9BRH9 671 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 NARFLQ9H6Q4 476 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 ZNRD1Q9P1U0 126 aa17.58■□□□□ 0.41
SPAST-204ENST00000621856 TAAR5O14804 337 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 HPRT1P00492 218 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 TLE4Q04727 773 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 H2BFWTQ7Z2G1 175 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 R3HDM4Q96D70 268 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 C11orf1Q9H5F2 150 aa17.58■□□□□ 0.4
SPAST-204ENST00000621856 RBFOX2O43251 390 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPAST-204ENST00000621856 CHST1O43916 411 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 IGHV1-8P0DP01 117 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 MMP9P14780 707 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 GNB2P62879 340 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 SPOCK3Q9BQ16 436 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 PATZ1Q9HBE1 687 aaKnown RBP17.57■□□□□ 0.4
SPAST-204ENST00000621856 CYTL1Q9NRR1 136 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 SESN1Q9Y6P5 492 aa17.57■□□□□ 0.4
SPAST-204ENST00000621856 PPIAL4CA0A0B4J2A2 164 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 P0C879 139 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 PPIAL4GP0DN37 164 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 TPT1P13693 172 aaKnown RBP17.56■□□□□ 0.4
SPAST-204ENST00000621856 CAV2P51636 162 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 OR2C3Q8N628 320 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 OR4S2Q8NH73 311 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 DDB2Q92466 427 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 SMIM3Q9BZL3 60 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 COA4Q9NYJ1 87 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 FBXL17Q9UF56 701 aa17.56■□□□□ 0.4
SPAST-204ENST00000621856 FAM24AA6NFZ4 105 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 MARCH11A6NNE9 402 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 ERVK-16P61578 105 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 CLEC9AQ6UXN8 241 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 OR10X1Q8NGY0 326 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 STOML3Q8TAV4 291 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 PCNPQ8WW12 178 aaKnown RBP17.55■□□□□ 0.4
SPAST-204ENST00000621856 KIAA1324LA8MWY0 1029 aaPredicted RBP17.55■□□□□ 0.4
SPAST-204ENST00000621856 J3QR06 171 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 TOR1AO14656 332 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 CLLU1Q5K131 121 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 C8orf31Q8N9H6 132 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 ZNF383Q8NA42 475 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 C8orf46Q8TAG6 207 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 GSX2Q9BZM3 304 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 SLC25A31Q9H0C2 315 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 TMEM133Q9H2Q1 129 aa17.55■□□□□ 0.4
SPAST-204ENST00000621856 A0A087X0M5 115 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 A0A1B0GX30 115 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 OVOL3O00110 214 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 SYNGR2O43760 224 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 ZNF833PQ6ZTB9 187 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 ABHD12Q8N2K0 398 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 LINC00311Q8N616 119 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 OR9G1Q8NH87 305 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 RAB40CQ96S21 281 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.54■□□□□ 0.4
SPAST-204ENST00000621856 LYRM2Q9NU23 88 aaPredicted RBP17.54■□□□□ 0.4
SPAST-204ENST00000621856 DOPEY1Q5JWR5 2465 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 MALRD1Q5VYJ5 2156 aa17.54■□□□□ 0.4
SPAST-204ENST00000621856 RPS10-NUDT3A0A1W2PQS6 291 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 FAM90A26D6RGX4 464 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 CRYZL1O95825 349 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 RPL23AP62750 156 aaKnown RBP17.53■□□□□ 0.4
SPAST-204ENST00000621856 EIF5AP63241 154 aaKnown RBP17.53■□□□□ 0.4
SPAST-204ENST00000621856 EWSR1Q01844 656 aaKnown RBP eCLIP17.53■□□□□ 0.4
SPAST-204ENST00000621856 MIDNQ504T8 468 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 C11orf42Q8N5U0 333 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 PHYHIPLQ96FC7 376 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 BSCL2Q96G97 398 aaPredicted RBP17.53■□□□□ 0.4
SPAST-204ENST00000621856 SSBP3Q9BWW4 388 aaPredicted RBP17.53■□□□□ 0.4
SPAST-204ENST00000621856 EPG5Q9HCE0 2579 aa17.53■□□□□ 0.4
SPAST-204ENST00000621856 IGSF23A1L1A6 192 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 RBMXL2O75526 392 aaKnown RBP17.52■□□□□ 0.4
SPAST-204ENST00000621856 TMEM50AO95807 157 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 LIPFP07098 398 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 IAPPP10997 89 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 NQO2P16083 231 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 NHLH2Q02577 135 aa17.52■□□□□ 0.4
SPAST-204ENST00000621856 RPL7L1Q6DKI1 246 aaKnown RBP17.52■□□□□ 0.4
SPAST-204ENST00000621856 SSX9Q7RTT3 188 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms