RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PLPPR2Q96GM1 343 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 WDR54Q9H977 334 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 PPP1R3CQ9UQK1 317 aa9.11□□□□□ -0.95
CDH1-214ENST00000621016 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 S100GP29377 79 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 CCKARP32238 428 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 ZXDAP98168 799 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 CXorf67Q86X51 503 aaPredicted RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 CT55Q8WUE5 264 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 DEFB127Q9H1M4 99 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 KCNS2Q9ULS6 477 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 ANAPC10Q9UM13 185 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 LOXL2Q9Y4K0 774 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 NBASA2RRP1 2371 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 DYSFO75923 2080 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 LOC102725191A0A1B0GVB3 256 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 OR6C6A6NF89 314 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 LRRC3CA6NJW4 275 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 OR7C2O60412 319 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 IAPPP10997 89 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 CA6P23280 308 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 SRD5A2P31213 254 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 B3GALT5-AS1P59052 145 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 EWSR1Q01844 656 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDH1-214ENST00000621016 TCF23Q7RTU1 214 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 OR52L2PQ8NGH6 319 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 ZNF586Q9NXT0 402 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 PCNX1Q96RV3 2341 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 hCG_38984A0A1B0GV85 526 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 TRAPPC2LH3BP13 241 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 FKBP2P26885 142 aaKnown RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 RAB9AP51151 201 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 TMEM267Q0VDI3 215 aaPredicted RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 IL24Q13007 206 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 ODF1Q14990 250 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 ATP1A1-AS1Q5TC04 95 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 NIT1Q86X76 327 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 OR8I2Q8N0Y5 310 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 OR2C3Q8N628 320 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 CPT1CQ8TCG5 803 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 MOB3AQ96BX8 217 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 MSI2Q96DH6 328 aaKnown RBP9.1□□□□□ -0.95
CDH1-214ENST00000621016 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 SFRP2Q96HF1 295 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 CDH20Q9HBT6 801 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 BET1LQ9NYM9 111 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 COL4A2P08572 1712 aa9.1□□□□□ -0.95
CDH1-214ENST00000621016 USF3Q68DE3 2245 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 LOC102723996A0A087X1L8 192 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 CHST1O43916 411 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 IGLV3-1P01715 115 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 CNN1P51911 297 aaKnown RBP9.09□□□□□ -0.95
CDH1-214ENST00000621016 ABHD17BQ5VST6 288 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 OR1K1Q8NGR3 316 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 CLDN23Q96B33 292 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 TMEM106BQ9NUM4 274 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 MTCH1Q9NZJ7 389 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 ERRFI1Q9UJM3 462 aaPredicted RBP9.09□□□□□ -0.95
CDH1-214ENST00000621016 IGSF23A1L1A6 192 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 SIRPB1O00241 398 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 WDR1O75083 606 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 TFF1P04155 84 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 ICAM4Q14773 271 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 PRAMEF5Q5TYX0 476 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 PRAMEF6Q5VXH4 476 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 C20orf204Q6ZNR8 217 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 IMMP2LQ96T52 175 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 CDX2Q99626 313 aaPredicted RBP9.09□□□□□ -0.95
CDH1-214ENST00000621016 SRD5A3Q9H8P0 318 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
CDH1-214ENST00000621016 ZFHX2Q9C0A1 2572 aaPredicted RBP9.09□□□□□ -0.96
CDH1-214ENST00000621016 YLPM1P49750 1951 aaKnown RBP9.09□□□□□ -0.96
CDH1-214ENST00000621016 EXPH5Q8NEV8 1989 aa9.09□□□□□ -0.96
CDH1-214ENST00000621016 DMXL1Q9Y485 3027 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 FBLL1A6NHQ2 334 aaKnown RBP9.08□□□□□ -0.96
CDH1-214ENST00000621016 PROB1E7EW31 1015 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 CORTO00230 105 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 RHBDL1O75783 438 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 DYNLT3P51808 116 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 PCBD1P61457 104 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 GPR157Q5UAW9 335 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 C1orf122Q6ZSJ8 110 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 MKXQ8IYA7 352 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 CCDC71LQ8N9Z2 235 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 PSMF1Q92530 271 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 SERPINE2P07093 398 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 GALR1P47211 349 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 FFAR4Q5NUL3 377 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 FAM53AQ6NSI3 398 aaPredicted RBP9.08□□□□□ -0.96
CDH1-214ENST00000621016 TMEM171Q8WVE6 324 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 OR5B12Q96R08 314 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 C20orf144Q9BQM9 153 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
CDH1-214ENST00000621016 A0A087WWC5 75 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms