RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MFAP2P55001 183 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 UBE2KP61086 200 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 SYT6Q5T7P8 510 aaPredicted RBP3.35□□□□□ -1.87
SNCA-213ENST00000618500 TMEM61Q8N0U2 210 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 OR13C9Q8NGT0 318 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 OR1L1Q8NH94 360 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 TNFAIP8L1Q8WVP5 186 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 SLC2A9Q9NRM0 540 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 H2AFY2Q9P0M6 372 aaPredicted RBP3.35□□□□□ -1.87
SNCA-213ENST00000618500 STEAP1Q9UHE8 339 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 TRBV7-1A0A0A6YYK4 115 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 ZNF705EA8MWA4 302 aaPredicted RBP3.34□□□□□ -1.87
SNCA-213ENST00000618500 FAM107AO95990 144 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 APOA2P02652 100 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 GTF2F2P13984 249 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 CTRB1P17538 263 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 NANOS3P60323 173 aaKnown RBP3.34□□□□□ -1.87
SNCA-213ENST00000618500 OXA1LQ15070 435 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 PTGES3Q15185 160 aaKnown RBP3.34□□□□□ -1.87
SNCA-213ENST00000618500 LTC4SQ16873 150 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 CTRB2Q6GPI1 263 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 ADGRG5Q8IZF4 528 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 Q8NAQ8 132 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 OR2AK2Q8NG84 335 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 TRUB1Q8WWH5 349 aaKnown RBP3.34□□□□□ -1.87
SNCA-213ENST00000618500 GALMQ96C23 342 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 MS4A10Q96PG2 267 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 AGMATQ9BSE5 352 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 RIMS4Q9H426 269 aaPredicted RBP3.34□□□□□ -1.87
SNCA-213ENST00000618500 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
SNCA-213ENST00000618500 TEX48A0A1B0GUV7 120 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 OR4C46A6NHA9 309 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 DFFBO76075 338 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 IGHV3-7P01780 117 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 ADARB1P78563 741 aaKnown RBP3.34□□□□□ -1.88
SNCA-213ENST00000618500 PLGLAQ15195 96 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 FAM106AQ4KMX7 169 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 CCDC58Q4VC31 144 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 LIPKQ5VXJ0 399 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 TMEM179BQ7Z7N9 219 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 RFT1Q96AA3 541 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 Q96M66 194 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 CCDC140Q96MF4 163 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 TAF9BQ9HBM6 251 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 TMEM138Q9NPI0 162 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 AKIP1Q9NQ31 210 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 IMPAD1Q9NX62 359 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 SMPD3Q9NY59 655 aaPredicted RBP3.34□□□□□ -1.88
SNCA-213ENST00000618500 TVP23BQ9NYZ1 205 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 ABRACLQ9P1F3 81 aa3.34□□□□□ -1.88
SNCA-213ENST00000618500 IGHV3-43A0A0B4J1X8 118 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 GEMIN2O14893 280 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 RPP14O95059 124 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 NAPSAO96009 420 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CST1P01037 141 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OCM2P0CE71 109 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OCMP0CE72 109 aaPredicted RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 T-ENOLP0DO92 83 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 IGHV3-43DP0DP04 118 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CALCBP10092 127 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 TPBGQ13641 420 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 GNMTQ14749 295 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 GUCA2BQ16661 112 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 DEFB135Q30KP9 77 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ODF3L2Q3SX64 289 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 DHFR2Q86XF0 187 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ADTRPQ96IZ2 230 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CSTL1Q9H114 145 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR2S2Q9NQN1 319 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MRPS18AQ9NVS2 196 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 TAGLN3Q9UI15 199 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 GNG8Q9UK08 70 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 C15orf61A6NNL5 157 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MPTX1A8MV57 137 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 PDCD6O75340 191 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CD1AP06126 327 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ZNF735P0CB33 412 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CD37P11049 281 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 FUT3P21217 361 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 SERPINB10P48595 397 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 NANOS2P60321 138 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 SNRPGP62308 76 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 RHOGP84095 191 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MEDAGQ5VYS4 303 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 THOC7Q6I9Y2 204 aaKnown RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 ZNF575Q86XF7 245 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR10V1Q8NGI7 309 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR8J1Q8NGP2 316 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 KCNG3Q8TAE7 436 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 EEF1AKMT3Q96AZ1 226 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 TAS2R1Q9NYW7 299 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 HSPB6O14558 160 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR7C1O76099 320 aaPredicted RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 GSTT2P0CG29 244 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 GSTT2BP0CG30 244 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 UBBP0CG47 229 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CBX3Q13185 183 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms