RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RPL23AP62750 156 aaKnown RBP10.34□□□□□ -0.75
CIITA-212ENST00000618207 ADAM5Q6NVV9 412 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 THNSL2Q86YJ6 484 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 KDF1Q8NAX2 398 aaPredicted RBP10.34□□□□□ -0.75
CIITA-212ENST00000618207 IL22RA2Q969J5 263 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 C20orf24Q9BUV8 137 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 ODAMA1E959 279 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CLEC18AA5D8T8 446 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 C1QTNF9BB2RNN3 333 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 SPINT2O43291 252 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 PITX3O75364 302 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 ZNF737O75373 536 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 SELENOVP59797 346 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 NKX6-1P78426 367 aaPredicted RBP10.34□□□□□ -0.75
CIITA-212ENST00000618207 TNFAIP6P98066 277 aaPredicted RBP10.34□□□□□ -0.75
CIITA-212ENST00000618207 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CLEC2AQ6UVW9 174 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CLEC18CQ8NCF0 446 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CA5BP1Q8WTZ4 195 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 TNCP24821 2201 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 A6NJY4 79 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 KIAA1324LA8MWY0 1029 aaPredicted RBP10.34□□□□□ -0.75
CIITA-212ENST00000618207 NDUFB7P17568 137 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 G0S2P27469 103 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 ERVFRD-1P60508 538 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CCL20P78556 96 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 PFDN5Q99471 154 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 SSX3Q99909 188 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 CLN8Q9UBY8 286 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 TACC2O95359 2948 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 RAI1Q7Z5J4 1906 aaPredicted RBP10.33□□□□□ -0.76
CIITA-212ENST00000618207 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 TBR1Q16650 682 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 RPL39P5Q59GN2 51 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 ZDHHC16Q969W1 377 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 CCL13Q99616 98 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 IFNL4K9M1U5 179 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 GYPAP02724 150 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 CD55P08174 381 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 OR13C7P0DN81 318 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 SNCAP37840 140 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 CD200P41217 278 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 TDGF1P3P51864 188 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 GUK1Q16774 197 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 RARRES2Q99969 163 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 GPR61Q9BZJ8 451 aa10.33□□□□□ -0.76
CIITA-212ENST00000618207 C16orf97H3BN30 126 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 IGHV1-46P01743 117 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 TUBG1P23258 451 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 MZT1Q08AG7 82 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 NCR3LG1Q68D85 454 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 GCM1Q9NP62 436 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 TUBG2Q9NRH3 451 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 AKAP6Q13023 2319 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 FCGR3BO75015 233 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 GPR12P47775 334 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 ZNF134P52741 427 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
CIITA-212ENST00000618207 OR2B8PP59922 312 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 BSPH1Q075Z2 132 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 CATR1Q13166 79 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 HAGHQ16775 308 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
CIITA-212ENST00000618207 DSCAML1Q8TD84 2053 aa10.32□□□□□ -0.76
CIITA-212ENST00000618207 DPRXA6NFQ7 191 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 RNF212BA8MTL3 300 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 SULT1A1P50225 295 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 UBE2KP61086 200 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 TMEM108Q6UXF1 575 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 FAM169BQ8N8A8 192 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 LSM10Q969L4 123 aaKnown RBP10.31□□□□□ -0.76
CIITA-212ENST00000618207 RAB40CQ96S21 281 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 ATP5SQ99766 215 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 M0R1X1 148 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 ZG16O60844 167 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 PROP1O75360 226 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 CLDN14O95500 239 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 IFNA5P01569 189 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 MBP02144 154 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 CD5P06127 495 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 TLE1Q04724 770 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 AKR1C8PQ5T2L2 129 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 AGMATQ9BSE5 352 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 RBKSQ9H477 322 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 VSIRQ9H7M9 311 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
CIITA-212ENST00000618207 TANC2Q9HCD6 1990 aa10.31□□□□□ -0.76
CIITA-212ENST00000618207 IGLV3-9A0A075B6K5 115 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 K7N7A8 449 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 MGST3O14880 152 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 RAB4AP20338 218 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 GNG10P50151 68 aa10.3□□□□□ -0.76
CIITA-212ENST00000618207 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms