RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 OR10C1Q96KK4 312 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 PAIP2BQ9ULR5 123 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 DSCAMO60469 2012 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 KANTRA0A1W2PQU2 76 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 RBFOX2O43251 390 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 RRASP10301 218 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 S100A11P31949 105 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 LPAR6P43657 344 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 ARHGDIBP52566 201 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 DSCR9P59020 149 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 ZNF345Q14585 488 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 FAM71F2Q6NXP2 309 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR9G1Q8NH87 305 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 GRPEL2Q8TAA5 225 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 Q96MF0 132 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 AGMATQ9BSE5 352 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 PIMREGQ9BSJ6 248 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 PLEKHA2Q9HB19 425 aa13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-210ENST00000617904 DNHD1Q96M86 4753 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 E5RGE8 158 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 TSC22D2O75157 780 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 HPRT1P00492 218 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 IGLV2-14P01704 120 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 NKX2-1P43699 371 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 GNG10P50151 68 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 VAMP2P63027 116 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 EIF5AP63241 154 aaKnown RBP13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 RTL8BQ17RB0 113 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 CT45A1Q5HYN5 189 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 TCF23Q7RTU1 214 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR4S2Q8NH73 311 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 CT45A3Q8NHU0 189 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 IFI27L2Q9H2X8 130 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 NSG2Q9Y328 171 aa13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 NSD1Q96L73 2696 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC3-210ENST00000617904 LOC105371242A0A075B767 164 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 LY86O95711 162 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 APOA2P02652 100 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 IGHV1-8P0DP01 117 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 MMP9P14780 707 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 CCL3L1P16619 93 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 DUTP33316 252 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 RAB32Q13637 225 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 DHRS7BQ6IAN0 325 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 BTNL3Q6UXE8 466 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF841Q6ZN19 808 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 PERPQ96FX8 193 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 ARL6Q9H0F7 186 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 TMEM133Q9H2Q1 129 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 MBD2Q9UBB5 411 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 TNFSF18Q9UNG2 199 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 LSM5Q9Y4Y9 91 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 MMP24Q9Y5R2 645 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 POMT1Q9Y6A1 747 aa13.77□□□□□ -0.21
TRAPPC3-210ENST00000617904 ARFGEF3Q5TH69 2177 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 A0A087X0M5 115 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 TRAV14DV4A0A0A6YYC5 116 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 A0A1B0GX30 115 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 F5H0A9 414 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 M0R1W7 72 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 ENSAO43768 121 aaKnown RBP13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 MED6O75586 246 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 LY6HO94772 140 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 IFNA7P01567 189 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 OPCMLQ14982 345 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 Q5BKY6 102 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF767PQ75MW2 155 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 LHFPL5Q8TAF8 219 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 HEXA-AS1Q9H8Q6 139 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 ONECUT1Q9UBC0 465 aa13.76□□□□□ -0.21
TRAPPC3-210ENST00000617904 FAM90A9PA6NNJ1 464 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 FAM90A26D6RGX4 464 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 G3V3Q6 166 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 J3QR06 171 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 SMAD7O15105 426 aaKnown RBP13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 TXNL1O43396 289 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 GPR137BO60478 399 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 FOXH1O75593 365 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 DEDDO75618 318 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 HRASP01112 189 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 LYL1P12980 280 aa13.75□□□□□ -0.21
TRAPPC3-210ENST00000617904 ATP5J2P56134 94 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms