RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 IFITM3Q01628 133 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 HES1Q14469 280 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 FBLN7Q53RD9 439 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 SLC38A6Q8IZM9 456 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 TMEM86BQ8N661 226 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 OR5AN1Q8NGI8 311 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 BORCS5Q969J3 196 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 JMJD8Q96S16 334 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 TCF19Q9Y242 345 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 POMT1Q9Y6A1 747 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 A0A0A6YYJ9 748 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 A6NDX4 124 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 LINC00473A8K010 186 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 H7C2Y5 167 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 LYRM1O43325 122 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 MC5RP33032 325 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 ECI1P42126 302 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 CCBE1Q6UXH8 406 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 CHIAQ9BZP6 476 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 SLC35D1Q9NTN3 355 aa12.52□□□□□ -0.41
PCDHGC3-204ENST00000617222 CLDN34H7C241 214 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 APOA2P02652 100 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 TMEM11P17152 192 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 S100GP29377 79 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 CCR6P51684 374 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 UBA52P62987 128 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 EBI3Q14213 229 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 DDB2Q92466 427 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 RITA1Q96K30 269 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 TBC1D24Q9ULP9 559 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 GPR132Q9UNW8 380 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 WASHC3Q9Y3C0 194 aa12.51□□□□□ -0.41
PCDHGC3-204ENST00000617222 MXRA5Q9NR99 2828 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 FCGR3BO75015 233 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 MOSP00540 346 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 CTSDP07339 412 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 BTCP35070 178 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 TAGLNQ01995 201 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 C16orf87Q6PH81 154 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 ZNF486Q96H40 463 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 C5orf66Q9H5L9 145 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 SLC2A9Q9NRM0 540 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 C14orf166Q9Y224 244 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 VSIG4Q9Y279 399 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
PCDHGC3-204ENST00000617222 RLN1P04808 185 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 PIGPP57054 158 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 CATR1Q13166 79 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 ASAH1Q13510 395 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 TBC1D26Q86UD7 250 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 SLC25A33Q9BSK2 321 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 COPZ2Q9P299 210 aa12.49□□□□□ -0.41
PCDHGC3-204ENST00000617222 RNF212BA8MTL3 300 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 TRIM77I1YAP6 450 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 MPPED1O15442 326 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 CHST1O43916 411 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 GPR137BO60478 399 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 PEX14O75381 377 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 IGKV1-16P04430 117 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 RRASP10301 218 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 RND3P61587 244 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 CBX3Q13185 183 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 MZT2BQ6NZ67 158 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 PRIMA1Q86XR5 153 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 Q8N6K4 173 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 CCDC71LQ8N9Z2 235 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 RBM14Q96PK6 669 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 JMJD1CQ15652 2540 aa12.48□□□□□ -0.41
PCDHGC3-204ENST00000617222 OR2F2O95006 317 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms