RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 C12orf45Q8N5I9 185 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-225ENST00000616944 LHX4Q969G2 390 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 PHB2Q99623 299 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-225ENST00000616944 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 J3QLI3 93 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 CDS2O95674 445 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 TGFAP01135 160 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 AVPP01185 164 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 SULT1A3P0DMM9 295 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 SULT1A4P0DMN0 295 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 ANXA3P12429 323 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 IL3RAP26951 378 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 C2orf68Q2NKX9 166 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 LIAT1Q6ZQX7 453 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 PDZD9Q8IXQ8 264 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 TCTEX1D1Q8N7M0 179 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 OR11H7Q8NGC8 314 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
CBWD1-225ENST00000616944 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
CBWD1-225ENST00000616944 SSNA1O43805 119 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 RAMP3O60896 148 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 TRAPPC2P0DI81 140 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 TRAPPC2BP0DI82 140 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 ZNF16P17020 682 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-225ENST00000616944 HTR1DP28221 377 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 THBS3P49746 956 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 ZNF816Q0VGE8 651 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-225ENST00000616944 LIN54Q6MZP7 749 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 AJUBAQ96IF1 538 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 ADTRPQ96IZ2 230 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 MED28Q9H204 178 aa12.28□□□□□ -0.44
CBWD1-225ENST00000616944 HMX3A6NHT5 357 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.44
CBWD1-225ENST00000616944 IGKV1-39P01597 117 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 IGKV1D-39P04432 117 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 HLA-GP17693 338 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 CXCL3P19876 107 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 REG1BP48304 166 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 FCN2Q15485 313 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 MINOS1Q5TGZ0 78 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 OR5AN1Q8NGI8 311 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 COQ8AQ8NI60 647 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 C18orf12Q96KH6 178 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 NABP2Q9BQ15 211 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 DPM3Q9P2X0 92 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 ITGB1BP2Q9UKP3 347 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.44
CBWD1-225ENST00000616944 MINOS1-NBL1R4GNA1 71 aa12.27□□□□□ -0.44
CBWD1-225ENST00000616944 SONP18583 2426 aaKnown RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 TRAV40A0A0B4J280 105 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 A0A1W2PPI3 338 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 A8MV72 311 aaPredicted RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 LEUTXA8MZ59 168 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 TXNL1O43396 289 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 SRPXP78539 464 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 MIDNQ504T8 468 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 OR2B11Q5JQS5 317 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 CYB5R2Q6BCY4 276 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 TGIF2LXQ8IUE1 241 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 SPAG16Q8N0X2 631 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 LGI3Q8N145 548 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 IL22RA2Q969J5 263 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 ZFHX3Q15911 3703 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 H0YJW9 148 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 RPA2P15927 270 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 KLF17Q5JT82 389 aaPredicted RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 SELENOHQ8IZQ5 122 aaKnown RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 SLC35G3Q8N808 338 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 RBPMSQ93062 196 aaKnown RBP12.26□□□□□ -0.45
CBWD1-225ENST00000616944 RPEQ96AT9 228 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 RAB18Q9NP72 206 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 PRELID3BQ9Y3B1 194 aa12.26□□□□□ -0.45
CBWD1-225ENST00000616944 NAV3Q8IVL0 2385 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 TNCP24821 2201 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 A0A1W2PRD5 423 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 A0A1W2PRF3 423 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 A0A1W2PRM7 423 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 NPFFO15130 113 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 FCGR3BO75015 233 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 ADAP1O75689 374 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 GAPDHP04406 335 aaKnown RBP12.25□□□□□ -0.45
CBWD1-225ENST00000616944 SERPINE2P07093 398 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 IGHV4-38-2P0DP08 117 aa12.25□□□□□ -0.45
CBWD1-225ENST00000616944 SAA4P35542 130 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms