RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	HMGN3	Q15651	99 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SPINK9	Q5DT21	86 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390		Q8IYB0	196 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	NUDT11	Q96G61	164 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TMPRSS5	Q9H3S3	457 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PRDM13	Q9H4Q3	707 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF727	A8MUV8	499 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	UBE2G2	P60604	165 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	EDDM3A	Q14507	147 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	LCN15	Q6UWW0	184 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390		Q6ZR03	302 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FGFRL1	Q8N441	504 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DCTN5	Q9BTE1	182 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	METTL1	Q9UBP6	276 aa	Known RBP	11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DUSP13	Q9UII6	198 aa		11.68	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZFP92	A6NM28	416 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IQCF6	A8MYZ5	107 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RBMXL2	O75526	392 aa	Known RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	BAX	Q07812	192 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SCGB1C1	Q8TD33	95 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	IL22RA2	Q969J5	263 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GALM	Q96C23	342 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GNG13	Q9P2W3	67 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DCHS1	Q96JQ0	3298 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PLCE1	Q9P212	2302 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	C12orf77	C9JDV5	145 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CECR9	P0C854	216 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	SSTR5	P35346	364 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GLIPR1	P48060	266 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ELL	P55199	621 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF146	Q15072	292 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	INO80C	Q6PI98	192 aa	Predicted RBP	11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	C15orf54	Q8N8G6	183 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF610	Q8N9Z0	462 aa		11.67	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RAB5B	P61020	215 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RPL30	P62888	115 aa	Known RBP	11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CYB561D1	Q8N8Q1	229 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	LFNG	Q8NES3	379 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TCTEX1D2	Q8WW35	142 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ABHD14B	Q96IU4	210 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	LIN7C	Q9NUP9	197 aa	Known RBP	11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	URGCP-MRPS24	S4R325	110 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A0U1RQK1	487 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF320	A2RRD8	509 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	C1orf196	B1AJZ1	125 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	HMGB3	O15347	200 aa	Known RBP	11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CLDN1	O95832	211 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	HBZ	P02008	142 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	LIPF	P07098	398 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	S100A7	P31151	101 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TAS2R30	P59541	319 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	NHLH1	Q02575	133 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	MOB1B	Q7L9L4	216 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	WDR31	Q8NA23	367 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR8G5	Q8NG78	346 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	NINJ1	Q92982	152 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RAB24	Q969Q5	203 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	ZNF479	Q96JC4	524 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RAB40C	Q96S21	281 aa		11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PTPRZ1	P23471	2315 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR5H1	A6NKK0	313 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	PKIA	P61925	76 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	C11orf53	Q8IXP5	236 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	FAM234A	Q9H0X4	552 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DMXL2	Q8TDJ6	3036 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390		A0A1W2PPE3	182 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TMEM30CP	A0ZSE6	113 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	DFFB	O76075	338 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CYB5R3	P00387	301 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	CD55	P08174	381 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	GCH1	P30793	250 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	COL10A1	Q03692	680 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	TLE4	Q04727	773 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	OR2Z1	Q8NG97	314 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	RPRM	Q9NS64	109 aa		11.65	□□□□□ -0.54
CACNA1C-231	ENST00000616390	HCFC1	P51610	2035 aa		11.65	□□□□□ -0.55
CACNA1C-231	ENST00000616390	UBE2L5P	A0A1B0GUS4	154 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390		H3BQ15	152 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HAPLN4	Q86UW8	402 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	MBNL3	Q9NUK0	354 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CLN8	Q9UBY8	286 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	YLPM1	P49750	1951 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	MMP9	P14780	707 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PAX1	P15863	534 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	LMO1	P25800	156 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ICAM4	Q14773	271 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	WDR82	Q6UXN9	313 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	COQ2	Q96H96	371 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	WIPI2	Q9Y4P8	454 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	MMP24	Q9Y5R2	645 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	WSB1	Q9Y6I7	421 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF292	O60281	2723 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	C17orf98	A8MV24	154 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	S1PR2	O95136	353 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	OR2C1	O95371	312 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	UBE2K	P61086	200 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms