RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CBX3Q13185 183 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 HLA-DRB5Q30154 266 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 HCP5Q6MZN7 132 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF833PQ6ZTB9 187 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 VMO1Q7Z5L0 202 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 LYG1Q8N1E2 194 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 LINC01356Q8N9X3 169 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 OR11H6Q8NGC7 330 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 PHB2Q99623 299 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 ZNF251Q9BRH9 671 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 HEXA-AS1Q9H8Q6 139 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 SIRT7Q9NRC8 400 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-212ENST00000613856 TGP01266 2768 aa9.29□□□□□ -0.92
SLIRP-212ENST00000613856 C3orf85A0A1B0GTC6 90 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 A0A1W2PPE3 182 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 HMX3A6NHT5 357 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TOR1AO14656 332 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 PROP1O75360 226 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TOX4O94842 621 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 OR5AC1P0C628 307 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 UCP1P25874 307 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 DUTP33316 252 aaKnown RBP9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TMEM187Q14656 261 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 PNKDQ8N490 385 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 C12orf45Q8N5I9 185 aaPredicted RBP9.28□□□□□ -0.92
SLIRP-212ENST00000613856 LRTM2Q8N967 370 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TMEM186Q96B77 213 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TP53RKQ96S44 253 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TBX15Q96SF7 602 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 S1PR3Q99500 378 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 MED28Q9H204 178 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 LPAR2Q9HBW0 351 aa9.28□□□□□ -0.92
SLIRP-212ENST00000613856 PIGBOS1A0A0B4J2F0 54 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 DBX1A6NMT0 343 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 M0R1X1 148 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 TNFSF12O43508 249 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 SSNA1O43805 119 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 SULT1A3P0DMM9 295 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 SULT1A4P0DMN0 295 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 COX7A1P24310 79 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 THBS3P49746 956 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 GZMKP49863 264 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 SLC9A3R2Q15599 337 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 ANKRD55Q3KP44 614 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 RPL39P5Q59GN2 51 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 DCAF12L2Q5VW00 463 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 OR51H1Q8NH63 302 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 CASTOR1Q8WTX7 329 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 IL22RA2Q969J5 263 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 ZNRD1Q9P1U0 126 aa9.27□□□□□ -0.93
SLIRP-212ENST00000613856 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 DUXBA0A1W2PPF3 345 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 LINC00473A8K010 186 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 RNASEK-C17orf49H0YIS7 233 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 J3QLI3 93 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 RBFOX2O43251 390 aaKnown RBP eCLIP9.26□□□□□ -0.93
SLIRP-212ENST00000613856 TXNL1O43396 289 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 VENTXO95231 258 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 RPA2P15927 270 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 HLA-GP17693 338 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 UBE2E1P51965 193 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 DLX1P56177 255 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 RPL30P62888 115 aaKnown RBP9.26□□□□□ -0.93
SLIRP-212ENST00000613856 KLRD1Q13241 179 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 C12orf54Q6X4T0 127 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
SLIRP-212ENST00000613856 LGI3Q8N145 548 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 CD300LFQ8TDQ1 290 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 TCTEX1D2Q8WW35 142 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 DDB2Q92466 427 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 TMEM56Q96MV1 263 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 GPHA2Q96T91 129 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 PCGF1Q9BSM1 259 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 TMEM56-RWDD3S4R434 201 aa9.26□□□□□ -0.93
SLIRP-212ENST00000613856 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 CDS2O95674 445 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 ARG1P05089 322 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 HTR1DP28221 377 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 TAGLNQ01995 201 aaKnown RBP9.25□□□□□ -0.93
SLIRP-212ENST00000613856 ZNF816Q0VGE8 651 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-212ENST00000613856 FCN2Q15485 313 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 SP6Q3SY56 376 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 MINOS1Q5TGZ0 78 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 OR11H7Q8NGC8 314 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 ASB13Q8WXK3 278 aa9.25□□□□□ -0.93
SLIRP-212ENST00000613856 RAB18Q9NP72 206 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms