RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 OR5AN1Q8NGI8 311 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 SSX3Q99909 188 aa11.85□□□□□ -0.51
CD48-203ENST00000613788 F8P00451 2351 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 ANK3Q12955 4377 aaKnown RBP11.84□□□□□ -0.51
CD48-203ENST00000613788 MAST4O15021 2626 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 MPPED1O15442 326 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 RRASP10301 218 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 CBX3Q13185 183 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 HABP2Q14520 560 aaPredicted RBP11.84□□□□□ -0.51
CD48-203ENST00000613788 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 Q6YL49 198 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
CD48-203ENST00000613788 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 ZNF383Q8NA42 475 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 CFHR4Q92496 578 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 NUBP2Q9Y5Y2 271 aa11.84□□□□□ -0.51
CD48-203ENST00000613788 TEX13DA0A0J9YY54 714 aaPredicted RBP11.83□□□□□ -0.52
CD48-203ENST00000613788 MDFIC2A0A1B0GVS7 189 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 LINC00473A8K010 186 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 H0YJW9 148 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 PTTG1O95997 202 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 AKR1C4P17516 323 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 F2RP25116 425 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 RAB13P51153 203 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 LINC00205P59089 165 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 TAS2R31P59538 309 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
CD48-203ENST00000613788 RTL8BQ17RB0 113 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 RGS21Q2M5E4 152 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 PLET1Q6UQ28 207 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 SGPP2Q8IWX5 399 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 OR51H1Q8NH63 302 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 ZFAND2BQ8WV99 257 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 CAPSLQ8WWF8 208 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
CD48-203ENST00000613788 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 C20orf85Q9H1P6 137 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
CD48-203ENST00000613788 KCNIP3Q9Y2W7 256 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
CD48-203ENST00000613788 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 H7C2Y5 167 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 ARPC1BO15143 372 aaKnown RBP11.82□□□□□ -0.52
CD48-203ENST00000613788 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 H2AFB2P0C5Z0 115 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 TMEM128Q5BJH2 165 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
CD48-203ENST00000613788 ZNF418Q8TF45 676 aaPredicted RBP11.82□□□□□ -0.52
CD48-203ENST00000613788 SSMEM1Q8WWF3 244 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 DDB2Q92466 427 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 FLVCR2Q9UPI3 526 aa11.82□□□□□ -0.52
CD48-203ENST00000613788 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 H3BUX3 64 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 IER3P46695 156 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 UBE2MP61081 183 aaKnown RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 HES1Q14469 280 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 DHRS7BQ6IAN0 325 aaPredicted RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 SPAG16Q8N0X2 631 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 FAM212BQ9NTI7 297 aaPredicted RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 PITPNC1Q9UKF7 332 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 C3orf85A0A1B0GTC6 90 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 RBFOX2O43251 390 aaKnown RBP eCLIP11.81□□□□□ -0.52
CD48-203ENST00000613788 FCGR3BO75015 233 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 VENTXO95231 258 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 MOSP00540 346 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 IGKV1D-33P01593 117 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 IGKV1-33P01594 117 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 CD24P25063 80 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 EBI3Q14213 229 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 PIFOQ8TCI5 191 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
CD48-203ENST00000613788 RNF5Q99942 180 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms