RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 ZNF383Q8NA42 475 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 TNFRSF14Q92956 283 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 UNKLQ9H9P5 680 aaKnown RBP11.61□□□□□ -0.55
USP39-220ENST00000613444 hCG_1809904A0A1W2PP81 198 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 A0A1W2PPE2 198 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 A0A1W2PR64 198 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 A0A1W2PRV1 198 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 CT45A6P0DMU7 189 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 CT45A5P0DMU8 189 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 CT45A7P0DMV0 189 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 RPA2P15927 270 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 LPAR6P43657 344 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 IAH1Q2TAA2 248 aaPredicted RBP11.61□□□□□ -0.55
USP39-220ENST00000613444 HYLS1Q96M11 299 aa11.61□□□□□ -0.55
USP39-220ENST00000613444 ITPR2Q14571 2701 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 PDZD2O15018 2839 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 A0A096LNT2 108 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 FOXH1O75593 365 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 PRTN3P24158 256 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
USP39-220ENST00000613444 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 LRRC75A-AS1Q8N1F1 130 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 ZBTB8BQ8NAP8 495 aaPredicted RBP11.6□□□□□ -0.55
USP39-220ENST00000613444 BEND2Q8NDZ0 799 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 CLEC7AQ9BXN2 247 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 KPTNQ9Y664 436 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 S1PR2O95136 353 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 MMP9P14780 707 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 ZNF816Q0VGE8 651 aaPredicted RBP11.6□□□□□ -0.55
USP39-220ENST00000613444 HLA-DRB5Q30154 266 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 FAM219AQ8IW50 185 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 S1PR3Q99500 378 aa11.6□□□□□ -0.55
USP39-220ENST00000613444 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.552e-7■■■■■ 31.3
USP39-220ENST00000613444 RBFOX2O43251 390 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP39-220ENST00000613444 MPC2O95563 127 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 P0C879 139 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 THBS3P49746 956 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 Q6ZRM9 215 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 OR4P4Q8NGL7 312 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 GRPEL2Q8TAA5 225 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
USP39-220ENST00000613444 TMEM186Q96B77 213 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 GPR146Q96CH1 333 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 CELSR1Q9NYQ6 3014 aa11.59□□□□□ -0.55
USP39-220ENST00000613444 H0YIZ8 118 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 FCGR3BO75015 233 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 COX7A1P24310 79 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 PSMB6P28072 239 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 LRRC37A5PQ49AS3 106 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 LDLRAD2Q5SZI1 272 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 PNKDQ8N490 385 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 OR4D5Q8NGN0 318 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 CD300LFQ8TDQ1 290 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 RBMXL1Q96E39 390 aaKnown RBP11.58□□□□□ -0.56
USP39-220ENST00000613444 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 MRPL20Q9BYC9 149 aaKnown RBP11.58□□□□□ -0.56
USP39-220ENST00000613444 GSKIPQ9P0R6 139 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 CR1P17927 2039 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 PIGBOS1A0A0B4J2F0 54 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 LY6LH3BQJ8 138 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 BUB1B-PAK6H3BSN5 160 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 TOR1AO14656 332 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 SLC25A16P16260 332 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 PRRX1P54821 245 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 FGL1Q08830 312 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 RAB32Q13637 225 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 IZUMO4Q1ZYL8 232 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 VMO1Q7Z5L0 202 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 PRELID3BQ9Y3B1 194 aa11.58□□□□□ -0.56
USP39-220ENST00000613444 ODF3BA8MYP8 253 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 PITX3O75364 302 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 SLC25A4P12235 298 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 REG1BP48304 166 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 KLRD1Q13241 179 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 KRTAP1-3Q8IUG1 177 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 OR13D1Q8NGV5 346 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 PLEKHA2Q9HB19 425 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 LPAR2Q9HBW0 351 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
USP39-220ENST00000613444 HPRT1P00492 218 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
USP39-220ENST00000613444 SLC25A6P12236 298 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 LYL1P12980 280 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
USP39-220ENST00000613444 G6PCP35575 357 aa11.57□□□□□ -0.56
USP39-220ENST00000613444 KIR2DS2P43631 304 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms