RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 FAM90A23PA8MXZ1 464 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 PGLYRP1O75594 196 aaPredicted RBP10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 FAM90A15PP0C7V4 464 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 FAM90A13PP0C7W8 464 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 FAM90A14PP0C7W9 464 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 FAM90A24PP0C7X0 464 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 UCNP55089 124 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 IL22RA2Q969J5 263 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF714Q96N38 554 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 NRIP2Q9BQI9 281 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 PKIBQ9C010 78 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 OR51B2Q9Y5P1 312 aa10.74□□□□□ -0.69
TNFAIP3-206ENST00000612899 ANKRD36A6QL64 1941 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 WNT5AP41221 380 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 TNFRSF9Q07011 255 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 C2orf88Q9BSF0 95 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 PDCD11Q14690 1871 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 PITX3O75364 302 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 EFEMP2O95967 443 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 CSN3P07498 182 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 MUC1P15941 1255 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 GPR6P46095 362 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 SNX22Q96L94 193 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 A0A1B0GWJ7 208 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 GAPDHP04406 335 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 HIST1H1BP16401 226 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 CTSSP25774 331 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 NFAM1Q8NET5 270 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 MESP1Q9BRJ9 268 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF236Q9UL36 1845 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 LTBP1Q14766 1721 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZIC3O60481 467 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF253O75346 499 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 COX5BP10606 129 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF658BQ4V348 819 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF837Q96EG3 531 aaPredicted RBP10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
TNFAIP3-206ENST00000612899 PSME4Q14997 1843 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 PATJQ8NI35 1801 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 LOC285556D6RIA3 1793 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 A0A0G2JK05 382 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 HELTA6NFD8 242 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 CRISP2P16562 243 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 COL8A1P27658 744 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 NUTF2P61970 127 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 C10orf113Q5VZT2 155 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 CYB561D1Q8N8Q1 229 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 NUDT11Q96G61 164 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 NPVFQ9HCQ7 196 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 CISD1Q9NZ45 108 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 HILPDAQ9Y5L2 63 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■■■■ 28.2
TNFAIP3-206ENST00000612899 F5H697 171 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 NEURL1O76050 574 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 ACP1P24666 158 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 SERF2P84101 59 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 FLVCR1-AS1Q8TAF5 88 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 Q8WTZ3 238 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF430Q9H8G1 570 aaPredicted RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 A0A0G2JMM0 328 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 A0A1W2PPB8 328 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 A0A1W2PRS3 328 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 KIR3DP1A8MWS1 328 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 UBE2CO00762 179 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 GPX4P36969 197 aaPredicted RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 GLIPR1P48060 266 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 KHDC3LQ587J8 217 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 C19orf48Q6RUI8 117 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 OR52M1Q8NGK5 317 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 IMMP1LQ96LU5 166 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 ZNF703Q9H7S9 590 aaPredicted RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 TRAV34A0A0B4J273 112 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
TNFAIP3-206ENST00000612899 DOCK7Q96N67 2140 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 CD99P14209 185 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 SOSTQ9BQB4 213 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 RTN4RQ9BZR6 473 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 SCN5AQ14524 2016 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 SRP14P37108 136 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 RPS11P62280 158 aaKnown RBP eCLIP10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 OR4A47Q6IF82 309 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 H1FOOQ8IZA3 346 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 LRRC75AQ8NAA5 344 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 ATG101Q9BSB4 218 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 CALYQ9NYX4 217 aa10.71□□□□□ -0.69
TNFAIP3-206ENST00000612899 CXorf1O96002 111 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms