RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MAFAQ8NHW3 353 aaPredicted RBP9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 DDA1Q9BW61 102 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 FHL1Q13642 323 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 DEFB123Q8N688 67 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 LYZL4Q96KX0 146 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 HEATR5BQ9P2D3 2071 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 MARCH11A6NNE9 402 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 CD99P14209 185 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 FLYWCH2Q96CP2 140 aaKnown RBP9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 FNDC1Q4ZHG4 1894 aaPredicted RBP9.33□□□□□ -0.92
CDC42EP3-206ENST00000611976 TMEM265A0A087WTH1 108 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 PRR19A6NJB7 356 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 PATE3B3GLJ2 98 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 S1PR2O95136 353 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 HIST1H1BP16401 226 aaKnown RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 LCN2P80188 198 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 CACNA1IQ9P0X4 2223 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 HLA-DQA1P01909 254 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 NHLH1Q02575 133 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 SPNS3Q6ZMD2 512 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 Q8WTZ3 238 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 IL17BQ9UHF5 180 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 R4GN57 208 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 CBY3A6NI87 242 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 K7N7A8 449 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 TMPRSS2O15393 492 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 TGIF2LYQ8IUE0 185 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 MAP1LC3CQ9BXW4 147 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 TRBV9A0A0B4J1U6 114 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 COLCA2A8K830 154 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZIC3O60481 467 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 CLPSP04118 112 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 TMEM11P17152 192 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 FAM214BQ7L5A3 538 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 CALHM1Q8IU99 346 aa9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 RSPO3Q9BXY4 272 aaPredicted RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 MRPL18Q9H0U6 180 aaKnown RBP9.32□□□□□ -0.92
CDC42EP3-206ENST00000611976 SHISA7A6NL88 538 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 LINC00587B1AMM8 73 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 CLEC3BP05452 202 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 CD82P27701 267 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 PTGDSP41222 190 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 LYZP61626 148 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 TNXAQ16473 311 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 TPRX1Q8N7U7 411 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 SDF2L1Q9HCN8 221 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZNF319Q9P2F9 582 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 JPT1Q9UK76 154 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 ARL14EPLP0DKL9 152 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 MPV17P39210 176 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 RIGQ13278 110 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 GAMTQ14353 236 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 ICAM4Q14773 271 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 ABLIM2Q6H8Q1 611 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 CCL17Q92583 94 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 SFXN3Q9BWM7 321 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 IGHV3OR15-7A0A075B7D8 119 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 SLC35E4Q6ICL7 350 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 OR4D5Q8NGN0 318 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 PILRBQ9UKJ0 227 aa9.31□□□□□ -0.92
CDC42EP3-206ENST00000611976 ASCL5Q7RTU5 278 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 A0A1B0GW64 132 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 COL8A1P27658 744 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 Q56UQ5 140 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 TGIF2LXQ8IUE1 241 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 SPSB4Q96A44 273 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 HSPB8Q9UJY1 196 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 C5orf52A6NGY3 159 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 NEURL1O76050 574 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 LYL1P12980 280 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 OR8I2Q8N0Y5 310 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZNF525Q8N782 197 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 TMEM140Q9NV12 185 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 ALPK2Q86TB3 2170 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 PLXNA4Q9HCM2 1894 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 ZNHIT1O43257 154 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 FCER1GP30273 86 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 CEBPDP49716 269 aaPredicted RBP9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 QRFPP83859 136 aa9.3□□□□□ -0.92
CDC42EP3-206ENST00000611976 P2RY6Q15077 328 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms