RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 IL22RA2Q969J5 263 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
TCF3-220ENST00000611869 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 RARRES2Q99969 163 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
TCF3-220ENST00000611869 FAM157AC9JC47 383 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 SPP1P10451 314 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 CD1BP29016 333 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 SPINK4O60575 86 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 TMEM11P17152 192 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 PRRX1P54821 245 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 SERF2P84101 59 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 OR4P4Q8NGL7 312 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 KCNMB2Q9Y691 235 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 ABCA1O95477 2261 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 IGHV3-72A0A0B4J1Y9 119 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 A8MXK9 166 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 G3V3Q6 166 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 K7N7A8 449 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 LILRA1O75019 489 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 RBP4P02753 201 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 S100A8P05109 93 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 FABP1P07148 127 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 GALR1P47211 349 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
TCF3-220ENST00000611869 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 VSTM2AQ8TAG5 236 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 TAF15Q92804 592 aaKnown RBP eCLIP11.13□□□□□ -0.63
TCF3-220ENST00000611869 RAB1CQ92928 201 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 RAB1BQ9H0U4 201 aa11.13□□□□□ -0.63
TCF3-220ENST00000611869 BATFQ16520 125 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 PRNDQ9UKY0 176 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 SS18L1O75177 396 aaPredicted RBP11.12□□□□□ -0.63
TCF3-220ENST00000611869 ORM2P19652 201 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 KHDC3LQ587J8 217 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 TMEM204Q9BSN7 226 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 ZDHHC11Q9H8X9 412 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 PGA5P0DJD9 388 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 BCL2P10415 239 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 RAB5AP20339 215 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
TCF3-220ENST00000611869 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
TCF3-220ENST00000611869 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
TCF3-220ENST00000611869 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
TCF3-220ENST00000611869 TGOLN2O43493 480 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 ZNF880Q6PDB4 577 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 DBX2Q6ZNG2 339 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
TCF3-220ENST00000611869 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
TCF3-220ENST00000611869 NAT8Q9UHE5 227 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 INSIG2Q9Y5U4 225 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 A0A1W2PN81 502 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 NTF4P34130 210 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 RND3P61587 244 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 PSG5Q15238 335 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 FOXL2NBQ6ZUU3 175 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 TRBV6-7A0A0A0MS04 114 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
TCF3-220ENST00000611869 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
TCF3-220ENST00000611869 DEFA6Q01524 100 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 NCMAPQ5T1S8 102 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 ZDHHC8Q9ULC8 765 aa11.11□□□□□ -0.63
TCF3-220ENST00000611869 C17orf98A8MV24 154 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 FBP1P09467 338 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 SPCS3P61009 180 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 TEPPQ6URK8 271 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 GCSAMQ8N6F7 178 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 GTF3C1Q12789 2109 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 KDF1Q8NAX2 398 aaPredicted RBP11.1□□□□□ -0.63
TCF3-220ENST00000611869 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
TCF3-220ENST00000611869 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 K7EQM0 130 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 FAM87AP0C7U9 286 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
TCF3-220ENST00000611869 MYPOPQ86VE0 399 aaPredicted RBP11.1□□□□□ -0.63
TCF3-220ENST00000611869 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 TCTEX1D1Q8N7M0 179 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
TCF3-220ENST00000611869 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms