RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GNRHRP30968 328 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 ARF6P62330 175 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 RPL31P62899 125 aaKnown RBP7.24□□□□□ -1.25
SMAD4-217ENST00000611848 HERPUD1Q15011 391 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 SP6Q3SY56 376 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 PHLDA2Q53GA4 152 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 LGI3Q8N145 548 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 BVESQ8NE79 360 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 MXRA5Q9NR99 2828 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 A0A1W2PPH5 198 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 M0R1W7 72 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TAAR5O14804 337 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 MGST3O14880 152 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 FGF16O43320 207 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TOX4O94842 621 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 FSHBP01225 129 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 HKR1P10072 659 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 MMP9P14780 707 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 SRPXP78539 464 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 FAM74A1Q5RGS3 127 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 C1orf122Q6ZSJ8 110 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 LYZL2Q7Z4W2 148 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 GAPTQ8N292 157 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 LRRC20Q8TCA0 184 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TMEM56Q96MV1 263 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 CABLES2Q9BTV7 478 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 SIRPDQ9H106 197 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 ZFP57Q9NU63 452 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 NUP50Q9UKX7 468 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TMED3Q9Y3Q3 217 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 SESN1Q9Y6P5 492 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TMEM56-RWDD3S4R434 201 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 C3orf85A0A1B0GTC6 90 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 KRBOX1C9JBD0 128 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 NPIPB11E5RHQ5 1161 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 SIRPB1O00241 398 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 SLC33A1O00400 549 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-217ENST00000611848 PSPNO60542 156 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 CRYZL1O95825 349 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 OR3A1P47881 315 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 BPIFB3P59826 476 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 S100A10P60903 97 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 HLA-DRB3P79483 266 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-217ENST00000611848 C5orf24Q7Z6I8 188 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 OR4A4PQ8NGN8 299 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 LHFPL5Q8TAF8 219 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 NEK7Q8TDX7 302 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TP53RKQ96S44 253 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TBX15Q96SF7 602 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 PCGF1Q9BSM1 259 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TMEM222Q9H0R3 208 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 PLEKHA2Q9HB19 425 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 C19orf12Q9NSK7 152 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 ONECUT1Q9UBC0 465 aa7.23□□□□□ -1.25
SMAD4-217ENST00000611848 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 IGKV1D-13A0A0B4J2D9 117 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 hCG_1809904A0A1W2PP81 198 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 A0A1W2PPE2 198 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 A0A1W2PR64 198 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 A0A1W2PRV1 198 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 hADV38S2A0JD32 116 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 K7EPK0 472 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 GPR31O00270 319 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 HSPB6O14558 160 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 BET1O15155 118 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 MBPP02686 304 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-217ENST00000611848 IGKV1-13P0DP09 117 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 M6PRP20645 277 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 EPHA1P21709 976 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 RPL12P30050 165 aaKnown RBP7.22□□□□□ -1.25
SMAD4-217ENST00000611848 EDDM3BP56851 147 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 SMCO1Q147U7 214 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 KLF17Q5JT82 389 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-217ENST00000611848 GPR157Q5UAW9 335 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 TMEM200BQ69YZ2 307 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF497Q6ZNH5 498 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 MOB1BQ7L9L4 216 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 VMO1Q7Z5L0 202 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 TBC1D26Q86UD7 250 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 H1FOOQ8IZA3 346 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-217ENST00000611848 FAM71E2Q8N5Q1 922 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF565Q8N9K5 539 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 LINC00052Q96N35 136 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 UNKLQ9H9P5 680 aaKnown RBP7.22□□□□□ -1.25
SMAD4-217ENST00000611848 ATRQ13535 2644 aa7.22□□□□□ -1.25
SMAD4-217ENST00000611848 DUXBA0A1W2PPF3 345 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 E5RGE8 158 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 CDS2O95674 445 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 GAPDHP04406 335 aaKnown RBP7.21□□□□□ -1.26
SMAD4-217ENST00000611848 IGHV4-38-2P0DP08 117 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 RCC1P18754 421 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-217ENST00000611848 PRTN3P24158 256 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 EIF5AP63241 154 aaKnown RBP7.21□□□□□ -1.26
SMAD4-217ENST00000611848 PAX5Q02548 391 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 EDDM3AQ14507 147 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 ZNF818PQ6ZRF7 136 aa7.21□□□□□ -1.26
SMAD4-217ENST00000611848 FAM219AQ8IW50 185 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms