RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 GPR35Q9HC97 309 aa16.08■□□□□ 0.17
SEMA3B-210ENST00000611067 URB1O60287 2271 aaKnown RBP16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 SPINK2P20155 84 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 LCN2P80188 198 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 ACSM6Q6P461 480 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 KCNIP4Q6PIL6 250 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 LINC00596Q86U02 117 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 ZDHHC23Q8IYP9 409 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 ZADH2Q8N4Q0 377 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 CPEB3Q8NE35 698 aaKnown RBP16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 SPTBN2O15020 2390 aa16.08■□□□□ 0.16
SEMA3B-210ENST00000611067 KIR2DL5BA0A0G2JN68 375 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 KIR2DL5BA0A0G2JPC4 375 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 IGLV2-14P01704 120 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 TUSC5Q8IXB3 177 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 KIR2DL5AQ8N109 375 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 OR1K1Q8NGR3 316 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 SLC25A22Q9H936 323 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 CBLN4Q9NTU7 201 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 FKBP11Q9NYL4 201 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 SPRR3Q9UBC9 169 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 ZFHX4Q86UP3 3567 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 COX5BP10606 129 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 TMEM14EPQ6UXP3 125 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 WDYHV1Q96HA8 205 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 SCNM1Q9BWG6 230 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 DCAF16Q9NXF7 216 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 PPP1R14DQ9NXH3 145 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 CRIM1Q9NZV1 1036 aa16.07■□□□□ 0.16
SEMA3B-210ENST00000611067 TMEM210A6NLX4 147 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 FAM90A26D6RGX4 464 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 NPIPB11E5RHQ5 1161 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 DEGS1O15121 323 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 HMGB3O15347 200 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 MBP02144 154 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 RAB4AP20338 218 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 TDGF1P3P51864 188 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 TLE1Q04724 770 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 PRSS8Q16651 343 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 ZNF585BQ52M93 769 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 SCGB1D1O95968 90 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 G0S2P27469 103 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 R3HDM4Q96D70 268 aa16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 LIN7CQ9NUP9 197 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 POLR3KQ9Y2Y1 108 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-210ENST00000611067 LOC400499M0QZD8 3231 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 AKAP13Q12802 2813 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 IGHV3-9P01782 118 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 OR8G2PQ6IF36 304 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 GATAD1Q8WUU5 269 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 NEIL1Q96FI4 390 aaPredicted RBP16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 OR1A1Q9P1Q5 309 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 TNRC6AQ8NDV7 1962 aaKnown RBP16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 HS3ST1O14792 307 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 SYNGR1O43759 233 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 IGHG3P01860 377 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 OR10G9Q8NGN4 311 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 OR10G7Q8NGN6 311 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 IL1F10Q8WWZ1 152 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 RDH5Q92781 318 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 BTF3L4Q96K17 158 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 IMMP2LQ96T52 175 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 LINC00470Q9BZP3 86 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 PPP1R3CQ9UQK1 317 aa16.05■□□□□ 0.16
SEMA3B-210ENST00000611067 TRAV24A0A0B4J272 114 aa16.04■□□□□ 0.16
SEMA3B-210ENST00000611067 RPL15P61313 204 aaKnown RBP16.04■□□□□ 0.16
SEMA3B-210ENST00000611067 ATP6V1FQ16864 119 aa16.04■□□□□ 0.16
SEMA3B-210ENST00000611067 APH1AQ96BI3 265 aa16.04■□□□□ 0.16
SEMA3B-210ENST00000611067 NAGKQ9UJ70 344 aa16.04■□□□□ 0.16
SEMA3B-210ENST00000611067 IL3RAP26951 378 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 OR10J1P30954 320 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 PLA2G5P39877 138 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 NRN1LQ496H8 165 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 IGFL3Q6UXB1 125 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 MRPL21Q7Z2W9 205 aaKnown RBP16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 OR5A2Q8NGI9 324 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 MLNRO43193 412 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 CLDN1O95832 211 aa16.03■□□□□ 0.16
SEMA3B-210ENST00000611067 PAGE4O60829 102 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 CD99P14209 185 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 ZNF16P17020 682 aaPredicted RBP16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 CCNOP22674 350 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 FAM78BQ5VT40 261 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 WFIKKN1Q96NZ8 548 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 TMEM147Q9BVK8 224 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 TRAPPC1Q9Y5R8 145 aa16.02■□□□□ 0.16
SEMA3B-210ENST00000611067 M0QZK8 103 aa16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 COX5AP20674 150 aa16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 TMEM144Q7Z5S9 345 aa16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 MRPL52Q86TS9 123 aaKnown RBP16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 FGFRL1Q8N441 504 aa16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 PXMP4Q9Y6I8 212 aa16.02■□□□□ 0.15
SEMA3B-210ENST00000611067 IFNL4K9M1U5 179 aa16.01■□□□□ 0.15
SEMA3B-210ENST00000611067 ZNF25P17030 456 aaPredicted RBP16.01■□□□□ 0.15
SEMA3B-210ENST00000611067 CHRNA7P36544 502 aa16.01■□□□□ 0.15
SEMA3B-210ENST00000611067 PPP1CBP62140 327 aa16.01■□□□□ 0.15
SEMA3B-210ENST00000611067 FFAR4Q5NUL3 377 aa16.01■□□□□ 0.15
SEMA3B-210ENST00000611067 RBM7Q9Y580 266 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms