RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 LTBP2Q14767 1821 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LRP11Q86VZ4 500 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 BAGE3Q86Y29 109 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 BAGE2Q86Y30 109 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 SELENOHQ8IZQ5 122 aaKnown RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LINC00052Q96N35 136 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 PCDH15Q96QU1 1955 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MS4A7Q9GZW8 240 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 PNRC2Q9NPJ4 139 aaKnown RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 COA4Q9NYJ1 87 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 IDI2-AS1Q9NZ38 188 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MARCH11A6NNE9 402 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MPTX1A8MV57 137 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 NDUFA2O43678 99 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 SLC25A17O43808 307 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ERVFRD-1P60508 538 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 B2MP61769 119 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM187Q14656 261 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 RPL39P5Q59GN2 51 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF660Q6AZW8 331 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 UQCC3Q6UW78 93 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 DBX2Q6ZNG2 339 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ABHD12Q8N2K0 398 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 POC1AQ8NBT0 407 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF331Q9NQX6 463 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 C1RLQ9NZP8 487 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 KIAA1671Q9BY89 1806 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 FREM1Q5H8C1 2179 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 IGKV1D-8A0A087WSZ0 117 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 A0A0A6YYD4 124 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 RBFOX3A6NFN3 312 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LEUTXA8MZ59 168 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MUC1P15941 1255 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZP3P21754 424 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ATP5J2P56134 94 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 SLC35E4Q6ICL7 350 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 HCP5Q6MZN7 132 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 KDF1Q8NAX2 398 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 OR1B1Q8NGR6 318 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 PLPPR1Q8TBJ4 325 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 RASL11BQ9BPW5 248 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MALRD1Q5VYJ5 2156 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LRRK1Q38SD2 2015 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MYO18BQ8IUG5 2567 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 C17orf100A8MU93 164 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LYNX1G3V0Z9 82 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 GNG7O60262 68 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 OR2A4O95047 310 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 PGA5P0DJD9 388 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 LYNX1P0DP58 116 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 SRP14P37108 136 aaKnown RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 CNN1P51911 297 aaKnown RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 Q6ZS92 163 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 DOLPP1Q86YN1 238 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 OR4P4Q8NGL7 312 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 OR2A7Q96R45 310 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 JPT1Q9UK76 154 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 IGKV1-27A0A075B6S5 117 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 RAB19A4D1S5 217 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 IFNL4K9M1U5 179 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 PPP1R2P9O14990 202 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 GAPDHP04406 335 aaKnown RBP6.15□□□□□ -1.42
CSDE1-218ENST00000610726 COX6B1P14854 86 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 ERVFC1-1P60608 527 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 ECSCRQ19T08 205 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 SPNS3Q6ZMD2 512 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 HSD17B13Q7Z5P4 300 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF561Q8N587 486 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 SLC24A4Q8NFF2 622 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 PLSCR4Q9NRQ2 329 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM140Q9NV12 185 aa6.15□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM218A2RU14 115 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 F8VVB4 439 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 F8VWA3 439 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 ZG16O60844 167 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 NMBP08949 121 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 SEC11BP0C7V7 166 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 LGALS7P47929 136 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 UCP3P55916 312 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 UBE2L3P68036 154 aaKnown RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 IFITM2Q01629 132 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 PRB3Q04118 309 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 HIST3H3Q16695 136 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 OR5B3Q8NH48 314 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 BSCL2Q96G97 398 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 RTBDNQ9BSG5 229 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 FBLN5Q9UBX5 448 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF320A2RRD8 509 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 SPINK4O60575 86 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 LILRA1O75019 489 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 PTBP3O95758 552 aaKnown RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 SLC25A5P05141 298 aaKnown RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 CD1BP29016 333 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 RPL27AP46776 148 aaKnown RBP6.15□□□□□ -1.43
CSDE1-218ENST00000610726 HGFACQ04756 655 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 GAMTQ14353 236 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms