RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 GLDNQ6ZMI3 551 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-209ENST00000609477 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-209ENST00000609477 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 OR4F17Q8NGA8 305 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 BORCS5Q969J3 196 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 RITA1Q96K30 269 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 OR4F4Q96R69 305 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-209ENST00000609477 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 ZFP57Q9NU63 452 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
HDDC2-209ENST00000609477 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 VWFP04275 2813 aa11.27□□□□□ -0.61
HDDC2-209ENST00000609477 HPGDSO60760 199 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
HDDC2-209ENST00000609477 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
HDDC2-209ENST00000609477 TMEM177Q53S58 311 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
HDDC2-209ENST00000609477 DHRS11Q6UWP2 260 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 OVCH2Q7RTZ1 564 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 C11orf44Q8N8P7 122 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 GPX8Q8TED1 209 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 SNAPC3Q92966 411 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
HDDC2-209ENST00000609477 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
HDDC2-209ENST00000609477 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
HDDC2-209ENST00000609477 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 PTHLHP12272 177 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 VDAC1P21796 283 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 CNTFRP26992 372 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 FCGR2CP31995 323 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 SPCS2Q15005 226 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 PLGLAQ15195 96 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 ZNF562Q6V9R5 426 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 ZNF66Q6ZN08 573 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
HDDC2-209ENST00000609477 DDB2Q92466 427 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
HDDC2-209ENST00000609477 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 OR51J1Q9H342 316 aa11.25□□□□□ -0.61
HDDC2-209ENST00000609477 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
HDDC2-209ENST00000609477 RBMX2Q9Y388 322 aaKnown RBP11.25□□□□□ -0.61
HDDC2-209ENST00000609477 MGAM2Q2M2H8 2515 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 IGHV7-81A0A0B4J1V7 117 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 LINC01548A6NM66 108 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 PPYP01298 95 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 IGLV2-14P01704 120 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 ELANEP08246 267 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
HDDC2-209ENST00000609477 FOXE3Q13461 319 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 DYRK1AQ13627 763 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 PSG5Q15238 335 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 TCTEX1D1Q8N7M0 179 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 DYNC2LI1Q8TCX1 351 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 ISOC1Q96CN7 298 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 C5orf30Q96GV9 206 aa11.24□□□□□ -0.61
HDDC2-209ENST00000609477 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 SHOXO15266 292 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 TSPAN15O95858 294 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 IGHG4P01861 327 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 RCVRNP35243 200 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 LINC00205P59089 165 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 MRPS10P82664 201 aaKnown RBP11.23□□□□□ -0.61
HDDC2-209ENST00000609477 CFHR3Q02985 330 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
HDDC2-209ENST00000609477 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 BVESQ8NE79 360 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 OR5H2Q8NGV7 314 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 EHFQ9NZC4 300 aa11.23□□□□□ -0.61
HDDC2-209ENST00000609477 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
HDDC2-209ENST00000609477 MEIS3P1A6NDR6 274 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 LINC00473A8K010 186 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 H3BMQ9 156 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 ZNF701M0R085 212 aaPredicted RBP11.22□□□□□ -0.61
HDDC2-209ENST00000609477 RGS5O15539 181 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 AADACP22760 399 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 CX3CL1P78423 397 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 SSBP1Q04837 148 aaKnown RBP11.22□□□□□ -0.61
HDDC2-209ENST00000609477 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
HDDC2-209ENST00000609477 ACTBL2Q562R1 376 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
HDDC2-209ENST00000609477 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
HDDC2-209ENST00000609477 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms