RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ELOVL5Q9NYP7 299 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 TRAV39A0A0B4J263 110 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 MDFIC2A0A1B0GVS7 189 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 CRYABP02511 175 aaKnown RBP18.77■□□□□ 0.6
SHANK2-220ENST00000608988 ESDP10768 282 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 PMP22Q01453 160 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 ZCCHC14Q8WYQ9 949 aaKnown RBP18.77■□□□□ 0.6
SHANK2-220ENST00000608988 GALMQ96C23 342 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 SFRP2Q96HF1 295 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 SPTBN5Q9NRC6 3674 aaKnown RBP18.76■□□□□ 0.59
SHANK2-220ENST00000608988 C1QTNF9BB2RNN3 333 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 RANP62826 216 aaKnown RBP18.76■□□□□ 0.59
SHANK2-220ENST00000608988 DCAF10Q5QP82 559 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 H2BFWTQ7Z2G1 175 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 SCCPDHQ8NBX0 429 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 C20orf144Q9BQM9 153 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 OR2D2Q9H210 308 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 XIRP2A4UGR9 3374 aa18.76■□□□□ 0.59
SHANK2-220ENST00000608988 ZG16O60844 167 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 RAMP3O60896 148 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 OTX2P32243 289 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 RPP30P78346 268 aaKnown RBP18.75■□□□□ 0.59
SHANK2-220ENST00000608988 GABRA6Q16445 453 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 SLC35E4Q6ICL7 350 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 OR1L1Q8NH94 360 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF703Q9H7S9 590 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-220ENST00000608988 GP6Q9HCN6 339 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 TRIOBPQ9H2D6 2365 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 OOEPA6NGQ2 149 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 FAM90A9PA6NNJ1 464 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 S1PR2O95136 353 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 FOXG1P55316 489 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-220ENST00000608988 TPPP2P59282 170 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 SSPNQ14714 243 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 TMEM204Q9BSN7 226 aa18.75■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF891A8MT65 544 aaPredicted RBP18.74■□□□□ 0.59
SHANK2-220ENST00000608988 NXPH2O95156 264 aa18.74■□□□□ 0.59
SHANK2-220ENST00000608988 RPL30P62888 115 aaKnown RBP18.74■□□□□ 0.59
SHANK2-220ENST00000608988 AARDQ4LEZ3 155 aa18.74■□□□□ 0.59
SHANK2-220ENST00000608988 OR2M7Q8NG81 312 aa18.74■□□□□ 0.59
SHANK2-220ENST00000608988 CMTM2Q8TAZ6 248 aa18.74■□□□□ 0.59
SHANK2-220ENST00000608988 KIAA2026Q5HYC2 2103 aa18.74■□□□□ 0.59
SHANK2-220ENST00000608988 CACNA1EQ15878 2313 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 A0A1W2PPV4 95 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 OPRK1P41145 380 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF816Q0VGE8 651 aaPredicted RBP18.73■□□□□ 0.59
SHANK2-220ENST00000608988 Q8N7P7 452 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 SGMS2Q8NHU3 365 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 CBLN4Q9NTU7 201 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 PILRBQ9UKJ0 227 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 NDUFB4O95168 129 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 KITLGP21583 273 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 CD82P27701 267 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 SRYQ05066 204 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 GAGE1Q13065 139 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 WDR86Q86TI4 376 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 NINJ1Q92982 152 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 HSD17B10Q99714 261 aaKnown RBP18.73■□□□□ 0.59
SHANK2-220ENST00000608988 TMEM106BQ9NUM4 274 aa18.73■□□□□ 0.59
SHANK2-220ENST00000608988 EYSQ5T1H1 3165 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 KMT2EQ8IZD2 1858 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 CD1BP29016 333 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 TLE1Q04724 770 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 TRIP6Q15654 476 aaKnown RBP18.72■□□□□ 0.59
SHANK2-220ENST00000608988 CST9LP1Q5W188 147 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 TEX43Q6ZNM6 134 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 TMEM256Q8N2U0 113 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 FAM216AQ8WUB2 273 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 C5orf30Q96GV9 206 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 LY96Q9Y6Y9 160 aa18.72■□□□□ 0.59
SHANK2-220ENST00000608988 C15orf62A8K5M9 175 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 C17orf98A8MV24 154 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZNHIT1O43257 154 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 TNFSF13O75888 250 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 HAND1O96004 215 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 MT-CO3P00414 261 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 GCH1P30793 250 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 PRSS8Q16651 343 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 OR5T1Q8NG75 326 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 TBX15Q96SF7 602 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 HES4Q9HCC6 221 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF705FA8MVS1 300 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-220ENST00000608988 C12orf77C9JDV5 145 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 YPEL1O60688 119 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 NEURL1O76050 574 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 CXorf1O96002 111 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF705DP0CH99 300 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZNF705BP0CI00 300 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-220ENST00000608988 OR3A1P47881 315 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ATP5G3P48201 142 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 OR1C1Q15619 314 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 TBC1D28Q2M2D7 210 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 MCEMP1Q8IX19 187 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 OR10G8Q8NGN5 311 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 BCL2L2Q92843 193 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZDHHC16Q969W1 377 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 YPEL2Q96QA6 119 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 ZDHHC11Q9H8X9 412 aa18.71■□□□□ 0.59
SHANK2-220ENST00000608988 RPLP1P05386 114 aaKnown RBP18.7■□□□□ 0.58
SHANK2-220ENST00000608988 C1QTNF9P0C862 333 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms