RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 TAF15Q92804 592 aaKnown RBP eCLIP10.66□□□□□ -0.7
CTCFL-218ENST00000608440 MED29Q9NX70 200 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 PSENENQ9NZ42 101 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 LRP5LA4QPB2 252 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 TIMP3P35625 211 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 UQCRFS1P47985 274 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 SGCBQ16585 318 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 SPANXN5Q5MJ07 72 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 CRIP3Q6Q6R5 217 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 C12orf54Q6X4T0 127 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 GTF2H5Q6ZYL4 71 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 SPATA12Q7Z6I5 190 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 CT55Q8WUE5 264 aa10.66□□□□□ -0.7
CTCFL-218ENST00000608440 CTXND1A0A1B0GTU2 59 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 ZNF10P21506 573 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-218ENST00000608440 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
CTCFL-218ENST00000608440 PRR22Q8IZ63 422 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 ZNF439Q8NDP4 499 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 EMC6Q9BV81 110 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 TRAV36DV7A0A075B6V5 113 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.65□□□□□ -0.7
CTCFL-218ENST00000608440 A0A1W2PQF6 199 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 CDIPTO14735 213 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 UFSP1Q6NVU6 142 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 ASCL4Q6XD76 172 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 ZNF818PQ6ZRF7 136 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 GAPTQ8N292 157 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 TSTD1Q8NFU3 115 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 FAM131CQ96AQ9 280 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 QTRT1Q9BXR0 403 aaKnown RBP10.65□□□□□ -0.7
CTCFL-218ENST00000608440 SLC7A10Q9NS82 523 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 IL36BQ9NZH7 164 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 PILRAQ9UKJ1 303 aa10.65□□□□□ -0.7
CTCFL-218ENST00000608440 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.71
CTCFL-218ENST00000608440 E9PLN8 166 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SPRY1O43609 319 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-218ENST00000608440 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-218ENST00000608440 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 C16orf52Q8NHV5 167 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SLC25A40Q8TBP6 338 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 ABHD14BQ96IU4 210 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 KNL1Q8NG31 2342 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 TMPRSS2O15393 492 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SNAI2O43623 268 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SLC25A17O43808 307 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SMIM10L1P0DMW3 83 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SRD5A2P31213 254 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 DPTQ07507 201 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 BAHD1Q8TBE0 780 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-218ENST00000608440 NINJ1Q92982 152 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SMIM10Q96HG1 83 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 OR2A5Q96R48 311 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SFXN3Q9BWM7 321 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 H3BUT2 72 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 K7EQM0 130 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 LGALS4P56470 323 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 RPS16P62249 146 aaKnown RBP10.64□□□□□ -0.71
CTCFL-218ENST00000608440 HBG1P69891 147 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 HBG2P69892 147 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 PSG7Q13046 419 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 PRAMEF5Q5TYX0 476 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 PRAMEF6Q5VXH4 476 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 PERPQ96FX8 193 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 COX14Q96I36 57 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 Q96M66 194 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 JMJD8Q96S16 334 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 PHF7Q9BWX1 381 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-218ENST00000608440 WDR54Q9H977 334 aa10.64□□□□□ -0.71
CTCFL-218ENST00000608440 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 J3QR06 171 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 M0R2Z0 102 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 SLC35E2P0CK97 266 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 DRD1P21728 446 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 TCL1AP56279 114 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 MYBPHQ13203 477 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 TNXAQ16473 311 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 TMEM177Q53S58 311 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 NT5CQ8TCD5 201 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 SSC4DQ8WTU2 575 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 HOXB13Q92826 284 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-218ENST00000608440 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
CTCFL-218ENST00000608440 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 NPIPA5E9PKD4 350 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 HSBP1O75506 76 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 CDAP32320 146 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 OR1D4P47884 311 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 FABP6P51161 128 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 UBE2G1P62253 170 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms