RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CD200P41217 278 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 DLX1P56177 255 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 ISOC2Q96AB3 205 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 WFIKKN1Q96NZ8 548 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 AGMATQ9BSE5 352 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 MYOD1P15172 320 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 COL8A2P25067 703 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 CATR1Q13166 79 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 LINC01560Q8TB33 94 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 ATP5SQ99766 215 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 HINT2Q9BX68 163 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 RNF7Q9UBF6 113 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 IFNA5P01569 189 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 IFNA17P01571 189 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 SULT1A1P50225 295 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 PUS1Q9Y606 427 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTSA-214ENST00000606788 LYNX1G3V0Z9 82 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 K7N7A8 449 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 MGST3O14880 152 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 H2AFB1P0C5Y9 115 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 LYNX1P0DP58 116 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 DVL1P1P54792 670 aaPredicted RBP13.18□□□□□ -0.3
CTSA-214ENST00000606788 ZFP82Q8N141 532 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 LYG1Q8N1E2 194 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 PRR7Q8TB68 274 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 RPS10P5Q9NQ39 176 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 CALYQ9NYX4 217 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 ARHGAP32A7KAX9 2087 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 IFNL4K9M1U5 179 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 MORN2Q502X0 79 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 PRAMEF5Q5TYX0 476 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 RXFP4Q8TDU9 374 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 RND1Q92730 232 aa13.18□□□□□ -0.3
CTSA-214ENST00000606788 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 PLAUP00749 431 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 SNX22Q96L94 193 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 RAB40CQ96S21 281 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 QTRT1Q9BXR0 403 aaKnown RBP13.17□□□□□ -0.3
CTSA-214ENST00000606788 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 K7ENP7 123 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 CD5P06127 495 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
CTSA-214ENST00000606788 MMP24Q9Y5R2 645 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
CTSA-214ENST00000606788 SPG11Q96JI7 2443 aa13.17□□□□□ -0.3
CTSA-214ENST00000606788 IGLV3-9A0A075B6K5 115 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 REG1BP48304 166 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 IRF2P14316 349 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 CCL3L1P16619 93 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 MZT1Q08AG7 82 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 SSX7Q7RTT5 188 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 LSM10Q969L4 123 aaKnown RBP13.16□□□□□ -0.3
CTSA-214ENST00000606788 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 SEC11CQ9BY50 192 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 GNG13Q9P2W3 67 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 WSB1Q9Y6I7 421 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
CTSA-214ENST00000606788 UMAD1C9J7I0 102 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 SOX15O60248 233 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
CTSA-214ENST00000606788 MRGPRGQ86SM5 289 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 PPP1R35Q8TAP8 253 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 Q8TCH9 128 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 C2CD4CQ8TF44 421 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 LRRC30A6NM36 301 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 SNAPINO95295 136 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 ARG1P05089 322 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
CTSA-214ENST00000606788 DTD1Q8TEA8 209 aa13.15□□□□□ -0.3
CTSA-214ENST00000606788 GZMHP20718 246 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 TNFSF4P23510 183 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 LOXL3P58215 753 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 RPS23P62266 143 aaKnown RBP13.14□□□□□ -0.31
CTSA-214ENST00000606788 CT45A1Q5HYN5 189 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 SPSB3Q6PJ21 355 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 CLRN3Q8NCR9 226 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 CT45A3Q8NHU0 189 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 ZNF665Q9H7R5 613 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 SAP30LQ9HAJ7 183 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 LHBP01229 141 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 NHLH1Q02575 133 aa13.14□□□□□ -0.31
CTSA-214ENST00000606788 TFF3Q07654 80 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms