RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PSG5Q15238 335 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 C19orf54Q5BKX5 351 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 TPRA1Q86W33 373 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 CENPOQ9BU64 300 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 GNB4Q9HAV0 340 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 A3GALT2U3KPV4 340 aa14.1□□□□□ -0.15
CCDC12-208ENST00000603885 I3L521 148 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 OR8U8P0C7N1 319 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 LUMP51884 338 aaPredicted RBP14.09□□□□□ -0.15
CCDC12-208ENST00000603885 LINC00205P59089 165 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 DGCR2P98153 550 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 SRSF7Q16629 238 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC12-208ENST00000603885 C9orf66Q5T8R8 295 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 ZNF773Q6PK81 442 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 ZNF562Q6V9R5 426 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 OR1N2Q8NGR9 330 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
CCDC12-208ENST00000603885 OR5B12Q96R08 314 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 CLCC1Q96S66 551 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 GINS4Q9BRT9 223 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 SLC35D1Q9NTN3 355 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 GAB2Q9UQC2 676 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 RBM7Q9Y580 266 aaKnown RBP14.09□□□□□ -0.15
CCDC12-208ENST00000603885 NUBP2Q9Y5Y2 271 aa14.09□□□□□ -0.15
CCDC12-208ENST00000603885 SEC14L6B5MCN3 397 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 CA2P00918 260 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 ZNF616Q08AN1 781 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 DCTN2Q13561 401 aaKnown RBP14.08□□□□□ -0.16
CCDC12-208ENST00000603885 PYHIN1Q6K0P9 492 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 Q6ZS49 121 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 PPP1R27Q86WC6 154 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCDC12-208ENST00000603885 SDHAF2Q9NX18 166 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 DAPK2Q9UIK4 370 aa14.08□□□□□ -0.16
CCDC12-208ENST00000603885 SLC25A17O43808 307 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 SOX15O60248 233 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 RAMP3O60896 148 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 SCGNO76038 276 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 EGR2P11161 476 aaPredicted RBP14.07□□□□□ -0.16
CCDC12-208ENST00000603885 DTYMKP23919 212 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 GNB1P62873 340 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 CBX3Q13185 183 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 CDNFQ49AH0 187 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 AKIRIN2Q53H80 203 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 ACTBL2Q562R1 376 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 UNQ5815/PRO19632Q6UWF5 114 aa14.07□□□□□ -0.16
CCDC12-208ENST00000603885 FAM103A1Q9BTL3 118 aaKnown RBP14.07□□□□□ -0.16
CCDC12-208ENST00000603885 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
CCDC12-208ENST00000603885 CD40LGP29965 261 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 TAGLNQ01995 201 aaKnown RBP14.06□□□□□ -0.16
CCDC12-208ENST00000603885 HACD4Q5VWC8 232 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 SFXN4Q6P4A7 337 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 H1FOOQ8IZA3 346 aaPredicted RBP14.06□□□□□ -0.16
CCDC12-208ENST00000603885 LFNGQ8NES3 379 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 ARPC1AQ92747 370 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 OR51E2Q9H255 320 aa14.06□□□□□ -0.16
CCDC12-208ENST00000603885 ELF5Q9UKW6 265 aaPredicted RBP14.06□□□□□ -0.16
CCDC12-208ENST00000603885 IGKV1D-8A0A087WSZ0 117 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 SNRPBP14678 240 aaKnown RBP14.05□□□□□ -0.16
CCDC12-208ENST00000603885 SDC2P34741 201 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 LGALS7P47929 136 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 RTL8BQ17RB0 113 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 ASPHD1Q5U4P2 390 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 GRPEL2Q8TAA5 225 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 LGALS14Q8TCE9 139 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 CASTOR1Q8WTX7 329 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 TPSG1Q9NRR2 321 aa14.05□□□□□ -0.16
CCDC12-208ENST00000603885 COL7A1Q02388 2944 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
CCDC12-208ENST00000603885 RRASP10301 218 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 PITPNAQ00169 270 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 FXYD3Q14802 87 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 NEDD8Q15843 81 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 ZNF260Q3ZCT1 412 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 C5orf30Q96GV9 206 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 ADTRPQ96IZ2 230 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 ST6GALNAC5Q9BVH7 336 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 DCSTAMPQ9H295 470 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 SLA2Q9H6Q3 261 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 SCOCQ9UIL1 159 aa14.04□□□□□ -0.16
CCDC12-208ENST00000603885 LOC100506127A0A0U1RQW1 187 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 TMEM235A6NFC5 223 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 SHOXO15266 292 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 CNIH1O95406 144 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 CTXN2P0C2S0 81 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 INSL3P51460 131 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 TPPP2P59282 170 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 GNG2P59768 71 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 MXD1Q05195 221 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 CD69Q07108 199 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 KCTD21Q4G0X4 260 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 TMEM177Q53S58 311 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 BVESQ8NE79 360 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 NUDCD2Q8WVJ2 157 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 MS4A10Q96PG2 267 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 ALX4Q9H161 411 aaPredicted RBP14.03□□□□□ -0.16
CCDC12-208ENST00000603885 RHBDL2Q9NX52 303 aa14.03□□□□□ -0.16
CCDC12-208ENST00000603885 DNAH9Q9NYC9 4486 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms