RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 METTL1Q9UBP6 276 aaKnown RBP17.14■□□□□ 0.33
PPFIA3-208ENST00000602726 SPATA2Q9UM82 520 aa17.14■□□□□ 0.33
PPFIA3-208ENST00000602726 A0A0A6YYH2 397 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 TRAV41A0A0B4J266 112 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 A6NJ64 397 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 SSX5O60225 188 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 RPS19P39019 145 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 MYCNOSP40205 109 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 CX3CL1P78423 397 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 TMEM65Q6PI78 240 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 MRPL41Q8IXM3 137 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 LINC00482Q8N8I6 264 aa17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 RCC1LQ96I51 464 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-208ENST00000602726 TRIM64CA6NLI5 447 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 FCN1O00602 326 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 SPDEFO95238 335 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 PSMB8P28062 276 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 PPIFP30405 207 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 CDX1P47902 265 aaPredicted RBP17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 TAGLNQ01995 201 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 CBX3Q13185 183 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 CNIH2Q6PI25 160 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 ABHD5Q8WTS1 349 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 CLCC1Q96S66 551 aa17.12■□□□□ 0.33
PPFIA3-208ENST00000602726 PRKDCP78527 4128 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 J3QRK9 145 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 DUS4LO95620 317 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 PRB2P02812 416 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 NDPQ00604 133 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 ECSCRQ19T08 205 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 C5orf30Q96GV9 206 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 ANXA10Q9UJ72 324 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 A3GALT2U3KPV4 340 aa17.11■□□□□ 0.33
PPFIA3-208ENST00000602726 CCL24O00175 119 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 NFYAP23511 347 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 LGALS7P47929 136 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 LUMP51884 338 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 RTL8BQ17RB0 113 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 BVESQ8NE79 360 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 RAX2Q96IS3 184 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 ADTRPQ96IZ2 230 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 DUX3Q96PT4 197 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 P2RX4Q99571 388 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 NECAP2Q9NVZ3 263 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 FBXO7Q9Y3I1 522 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 OR2W1Q9Y3N9 320 aa17.1■□□□□ 0.33
PPFIA3-208ENST00000602726 SLC25A17O43808 307 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 CA2P00918 260 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 IGLV1-40P01703 118 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 RRASP10301 218 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 TMEM267Q0VDI3 215 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 FOXB2Q5VYV0 432 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 ZNF562Q6V9R5 426 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 REC114Q7Z4M0 266 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 MINDY2Q8NBR6 621 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 S100A16Q96FQ6 103 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 FUNDC2Q9BWH2 189 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 KLK15Q9H2R5 256 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 AUNIPQ9H7T9 357 aa17.09■□□□□ 0.33
PPFIA3-208ENST00000602726 HLA-DQB1P01920 261 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 DUTP33316 252 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 CRIP2P52943 208 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 RAB25P57735 213 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 ARPC4P59998 168 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 DEFB136Q30KP8 78 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 UBE2NLQ5JXB2 153 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 PPP1R27Q86WC6 154 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 ZNF645Q8N7E2 425 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 BEST4Q8NFU0 473 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 C4orf3Q8WVX3 66 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 HARBI1Q96MB7 349 aa17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 FOXA2Q9Y261 457 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-208ENST00000602726 A0A1W2PN81 502 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 SHOXO15266 292 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 SLC22A5O76082 557 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 EGR2P11161 476 aaPredicted RBP17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 CHRNA7P36544 502 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 HOGA1Q86XE5 327 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 GVQW1Q8N7I0 195 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 TCTEX1D1Q8N7M0 179 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 SAMD12Q8N8I0 201 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 OR13F1Q8NGS4 319 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 MYOZ3Q8TDC0 251 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 SLC25A46Q96AG3 418 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 UBE2E2Q96LR5 201 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 FAM103A1Q9BTL3 118 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 MCRIP2Q9BUT9 160 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 GPR61Q9BZJ8 451 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 TPSG1Q9NRR2 321 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 NUBP2Q9Y5Y2 271 aa17.07■□□□□ 0.32
PPFIA3-208ENST00000602726 XRCC3O43542 346 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 IGLV2-23P01705 113 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 RAB9AP51151 201 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 NCS1P62166 190 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 TMEM177Q53S58 311 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 C19orf54Q5BKX5 351 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 UNQ5815/PRO19632Q6UWF5 114 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 ZNF491Q8N8L2 437 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 ARPC1AQ92747 370 aa17.06■□□□□ 0.32
PPFIA3-208ENST00000602726 VSIG4Q9Y279 399 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms