RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 FAM209BQ5JX69 171 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 C1orf100Q5SVJ3 147 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 OR10K2Q6IF99 312 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 HAPLN4Q86UW8 402 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 C8orf59Q8N0T1 100 aaPredicted RBP7.33□□□□□ -1.24
VRK3-224ENST00000601849 NANOGP1Q8N7R0 232 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
VRK3-224ENST00000601849 ZNF485Q8NCK3 441 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 OR6M1Q8NGM8 313 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 PTX4Q96A99 478 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 PLGRKTQ9HBL7 147 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 C12orf4Q9NQ89 552 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SLC35D1Q9NTN3 355 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 SLC2A8Q9NY64 477 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 COA4Q9NYJ1 87 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 HSF4Q9ULV5 492 aa7.33□□□□□ -1.24
VRK3-224ENST00000601849 RBM7Q9Y580 266 aaKnown RBP7.33□□□□□ -1.24
VRK3-224ENST00000601849 ANKRD65E5RJM6 399 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 M0R1X1 148 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 SHOXO15266 292 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 CREBL2O60519 120 aaPredicted RBP7.32□□□□□ -1.24
VRK3-224ENST00000601849 TUSC2O75896 110 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 IGKV1-16P04430 117 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 RTL8BQ17RB0 113 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 ADAMTSL5Q6ZMM2 481 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 CEACAM19Q7Z692 300 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 LAX1Q8IWV1 398 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 PACRGLQ8N7B6 248 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 BVESQ8NE79 360 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 BPIFB6Q8NFQ5 453 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 OR10J5Q8NHC4 309 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 CMSS1Q9BQ75 279 aaKnown RBP7.32□□□□□ -1.24
VRK3-224ENST00000601849 MND1Q9BWT6 205 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 TINAGL1Q9GZM7 467 aaPredicted RBP7.32□□□□□ -1.24
VRK3-224ENST00000601849 AK3Q9UIJ7 227 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 CEPT1Q9Y6K0 416 aa7.32□□□□□ -1.24
VRK3-224ENST00000601849 HYDINQ4G0P3 5121 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 TMEM14DPA8MWL7 114 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 TRDCB7Z8K6 153 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 OR2A4O95047 310 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 SCTP09683 121 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 MAP2K4P45985 399 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 PSMD7P51665 324 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 VMA21Q3ZAQ7 101 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 ZNF343Q6P1L6 599 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 AHSA2Q719I0 299 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 ZNF383Q8NA42 475 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 OR56B1Q8NGI3 324 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 OR4A4PQ8NGN8 299 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 HARBI1Q96MB7 349 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 NICN1Q9BSH3 213 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 Q9N2K0 584 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 PLCXD1Q9NUJ7 323 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 GAR1Q9NY12 217 aaKnown RBP7.31□□□□□ -1.24
VRK3-224ENST00000601849 SCN3BQ9NY72 215 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 RDH8Q9NYR8 311 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 OR1A1Q9P1Q5 309 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 PSORS1C1Q9UIG5 152 aa7.31□□□□□ -1.24
VRK3-224ENST00000601849 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
VRK3-224ENST00000601849 MSGN1A6NI15 193 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 FAM223BA6NKX1 122 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 SOCS1O15524 211 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 ARL6IP5O75915 188 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 CD3GP09693 182 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 OR9G9P0C7N8 305 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 CD81P60033 236 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 UNC119Q13432 240 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 SPHARQ15513 63 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 MED22Q15528 200 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 TRAM1Q15629 374 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 LRRTM1Q86UE6 522 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 SLC25A42Q86VD7 318 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 FAM223AQ8IWN6 122 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 FAM89BQ8N5H3 189 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 TEX45Q8NA69 505 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 DYNLRB2Q8TF09 96 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 KCTD12Q96CX2 325 aaKnown RBP7.3□□□□□ -1.24
VRK3-224ENST00000601849 ADTRPQ96IZ2 230 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 SPIN2AQ99865 258 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 SPIN2BQ9BPZ2 258 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 NEURL2Q9BR09 285 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 LPAR5Q9H1C0 372 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 VCXQ9H320 206 aa7.3□□□□□ -1.24
VRK3-224ENST00000601849 PTGES3LE9PB15 166 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 BET1O15155 118 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 CSN3P07498 182 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 GADD45AP24522 165 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 TALDO1P37837 337 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 RAB11BQ15907 218 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 TNXAQ16473 311 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 TMEM177Q53S58 311 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 RNLSQ5VYX0 342 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 IL34Q6ZMJ4 242 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 ACOT12Q8WYK0 555 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 UFD1Q92890 307 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 ARHGAP5-AS1Q96IT6 56 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms