RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 OR10J5Q8NHC4 309 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 MAFIPQ8WZ33 124 aa17.57■□□□□ 0.4
SSBP4-209ENST00000601357 TSNAXQ99598 290 aaKnown RBP17.57■□□□□ 0.4
SSBP4-209ENST00000601357 TXNL4BQ9NX01 149 aaKnown RBP17.57■□□□□ 0.4
SSBP4-209ENST00000601357 ZNF230Q9UIE0 474 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-209ENST00000601357 METTL21EPA6NDL7 271 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 SEC14L6B5MCN3 397 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 AKIRIN2Q53H80 203 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 PPP1R27Q86WC6 154 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 FCGR1BQ92637 280 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 OR5B12Q96R08 314 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 B9D2Q9BPU9 175 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 OR2D2Q9H210 308 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSBP4-209ENST00000601357 SDHAF2Q9NX18 166 aa17.56■□□□□ 0.4
SSBP4-209ENST00000601357 A0A075B6Q4 140 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 SMIM30A4D0T7 59 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 CA2P00918 260 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 APOA2P02652 100 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 OR8U9P0C7N5 309 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 PSMB9P28065 219 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 TMEM267Q0VDI3 215 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 DCTN2Q13561 401 aaKnown RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 FLYWCH2Q96CP2 140 aaKnown RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 C5orf30Q96GV9 206 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 CLCC1Q96S66 551 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 FAM103A1Q9BTL3 118 aaKnown RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 YTHDF1Q9BYJ9 559 aaKnown RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 TPSG1Q9NRR2 321 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 ELF5Q9UKW6 265 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-209ENST00000601357 A3GALT2U3KPV4 340 aa17.55■□□□□ 0.4
SSBP4-209ENST00000601357 NOTOA8MTQ0 251 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 IGLV2-23P01705 113 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 RPS16P62249 146 aaKnown RBP17.54■□□□□ 0.4
SSBP4-209ENST00000601357 SSBP2P81877 361 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-209ENST00000601357 PYHIN1Q6K0P9 492 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 CASTOR1Q8WTX7 329 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 ATG5Q9H1Y0 275 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 Q9H521 79 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 SLC35D1Q9NTN3 355 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 STUB1Q9UNE7 303 aa17.54■□□□□ 0.4
SSBP4-209ENST00000601357 IGKV1D-8A0A087WSZ0 117 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 SLC25A17O43808 307 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ARFRP1Q13795 201 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ARL6IP1Q15041 203 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ZNF260Q3ZCT1 412 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ACTBL2Q562R1 376 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 UNQ5815/PRO19632Q6UWF5 114 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 TPRA1Q86W33 373 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 LFNGQ8NES3 379 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ABHD5Q8WTS1 349 aa17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ALX4Q9H161 411 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-209ENST00000601357 LSM4Q9Y4Z0 139 aaKnown RBP17.53■□□□□ 0.4
SSBP4-209ENST00000601357 ARPC1BO15143 372 aaKnown RBP17.52■□□□□ 0.4
SSBP4-209ENST00000601357 CRYGBP07316 175 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 LGALS1P09382 135 aaKnown RBP17.52■□□□□ 0.4
SSBP4-209ENST00000601357 DTYMKP23919 212 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 INSL3P51460 131 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 VAX1Q5SQQ9 334 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 C11orf87Q6NUJ2 197 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 H1FOOQ8IZA3 346 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-209ENST00000601357 ARPC1AQ92747 370 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 CENPOQ9BU64 300 aa17.52■□□□□ 0.4
SSBP4-209ENST00000601357 TALDO1P37837 337 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 LGALS7P47929 136 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
SSBP4-209ENST00000601357 CD69Q07108 199 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 ZNF773Q6PK81 442 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 DDB2Q92466 427 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 DCUN1D4Q92564 292 aa17.51■□□□□ 0.39
SSBP4-209ENST00000601357 ECI1P42126 302 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 FXYD3Q14802 87 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 CDNFQ49AH0 187 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 TMEM177Q53S58 311 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 HACD4Q5VWC8 232 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 PRR25Q96S07 402 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 GINS4Q9BRT9 223 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 SSR3Q9UNL2 185 aa17.5■□□□□ 0.39
SSBP4-209ENST00000601357 LINC01619G3V211 115 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 PJVKQ0ZLH3 352 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 DLX4Q92988 240 aaPredicted RBP17.49■□□□□ 0.39
SSBP4-209ENST00000601357 RHOVQ96L33 236 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 HARBI1Q96MB7 349 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 OR51E2Q9H255 320 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 SLA2Q9H6Q3 261 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 DAPK2Q9UIK4 370 aa17.49■□□□□ 0.39
SSBP4-209ENST00000601357 IGHV4OR15-8A0A075B7B6 117 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 A0A087WW49 117 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 SRRM4A7MD48 611 aaKnown RBP17.48■□□□□ 0.39
SSBP4-209ENST00000601357 OVOL1O14753 267 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 DUTP33316 252 aaKnown RBP17.48■□□□□ 0.39
SSBP4-209ENST00000601357 SLURP1P55000 103 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 MRGPRG-AS1Q2M3A8 158 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 SFXN4Q6P4A7 337 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 BVESQ8NE79 360 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 GRPEL2Q8TAA5 225 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 MS4A10Q96PG2 267 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 DCSTAMPQ9H295 470 aa17.48■□□□□ 0.39
SSBP4-209ENST00000601357 ZNF256Q9Y2P7 627 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-209ENST00000601357 RRP15Q9Y3B9 282 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms