RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 FAM216AQ8WUB2 273 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 TOLLIPQ9H0E2 274 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.85
VRK3-223ENST00000601341 COA4Q9NYJ1 87 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 KIAA1456Q9P272 454 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 RNF150Q9ULK6 438 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 TRAV1-1A0A0B4J248 108 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 FAM24AA6NFZ4 105 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 C9JQL5 133 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 HSD17B6O14756 317 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 AGPAT2O15120 278 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 SSSCA1O60232 199 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 HBE1P02100 147 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 CXorf66Q5JRM2 361 aaPredicted RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 ZNF561Q8N587 486 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 TCTEX1D1Q8N7M0 179 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 HSD17B11Q8NBQ5 300 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 OR2G3Q8NGZ4 309 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 RBMXL1Q96E39 390 aaKnown RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 SDSLQ96GA7 329 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 SNX22Q96L94 193 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 ATP5SQ99766 215 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 ZNF665Q9H7R5 613 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 BIN3Q9NQY0 253 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 METRNQ9UJH8 293 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 MMP24Q9Y5R2 645 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 MEX3AA1L020 520 aaKnown RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 COLCA2A8K830 154 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 ZNF737O75373 536 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 MT-ND4LP03901 98 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 TFF1P04155 84 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 OR3A1P47881 315 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 SULT1A1P50225 295 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 PPT1P50897 306 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 RAB2AP61019 212 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 PAX5Q02548 391 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 SH3BGRL3Q9H299 93 aa9.7□□□□□ -0.86
VRK3-223ENST00000601341 HRNRQ86YZ3 2850 aaPredicted RBP9.7□□□□□ -0.86
VRK3-223ENST00000601341 TMEM30CPA0ZSE6 113 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 NKX6-3A6NJ46 265 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 KIAA1324LA8MWY0 1029 aaPredicted RBP9.69□□□□□ -0.86
VRK3-223ENST00000601341 MGST3O14880 152 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 TXNL1O43396 289 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 CHST1O43916 411 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 FSTL3O95633 263 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 F12P00748 615 aaPredicted RBP9.69□□□□□ -0.86
VRK3-223ENST00000601341 GYPAP02724 150 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 COL8A2P25067 703 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 PAX9P55771 341 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 SLC35E4Q6ICL7 350 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 ZNF788Q6ZQV5 615 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 DYSFO75923 2080 aa9.69□□□□□ -0.86
VRK3-223ENST00000601341 LYNX1G3V0Z9 82 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 TMEM50AO95807 157 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 IGLV2-14P01704 120 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 IFNA4P05014 189 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 LYNX1P0DP58 116 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 DAOP14920 347 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 MAS1LP35410 378 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 CDKN1AP38936 164 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 AESQ08117 197 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 KRBOX4Q5JUW0 171 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 CLEC9AQ6UXN8 241 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 TMEM182Q6ZP80 229 aaPredicted RBP9.68□□□□□ -0.86
VRK3-223ENST00000601341 ODF3L1Q8IXM7 274 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 ZNRF1Q8ND25 227 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 RXFP4Q8TDU9 374 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 GPR146Q96CH1 333 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 CCL13Q99616 98 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 PSMG3Q9BT73 122 aaPredicted RBP9.68□□□□□ -0.86
VRK3-223ENST00000601341 FAM234AQ9H0X4 552 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 TRAPPC2LQ9UL33 140 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 ARID1AO14497 2285 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 LRBAP50851 2863 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 OVOL3O00110 214 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 TMPRSS2O15393 492 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 IFNA5P01569 189 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 HSPB1P04792 205 aaKnown RBP9.68□□□□□ -0.86
VRK3-223ENST00000601341 CRYBA1P05813 215 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 FHITP49789 147 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 DYNLT3P51808 116 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 EFNA4P52798 201 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 HBG1P69891 147 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 HBG2P69892 147 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 CLINT1Q14677 625 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 LINC00518Q8N0U6 118 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 COQ2Q96H96 371 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 GAFA1Q96PS6 74 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 KCNIP1Q9NZI2 227 aa9.68□□□□□ -0.86
VRK3-223ENST00000601341 C7orf77A4D0Y5 90 aa9.67□□□□□ -0.86
VRK3-223ENST00000601341 RBFOX3A6NFN3 312 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms