RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 NUDT19A8MXV4 375 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 DUS4LO95620 317 aaKnown RBP13.45□□□□□ -0.26
HERC3-214ENST00000601319 IGLV1-40P01703 118 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 TGFBR1P36897 503 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 NDPQ00604 133 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 OXLD1Q5BKU9 147 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 CNIH2Q6PI25 160 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 ADTRPQ96IZ2 230 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 P2RX4Q99571 388 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 ST6GALNAC5Q9BVH7 336 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 SLC35D1Q9NTN3 355 aa13.45□□□□□ -0.26
HERC3-214ENST00000601319 DNAH3Q8TD57 4116 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 TRAV18A0A075B6X5 111 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 RPS19P39019 145 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 MYCNOSP40205 109 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 LINC00205P59089 165 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 CX3CL1P78423 397 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 PLGLAQ15195 96 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 PSG5Q15238 335 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 C18orf65Q6ZTR6 163 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 MRPL41Q8IXM3 137 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 TCTEX1D1Q8N7M0 179 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 MINDY2Q8NBR6 621 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 OR13F1Q8NGS4 319 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 KCTD12Q96CX2 325 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 AUNIPQ9H7T9 357 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 DIABLOQ9NR28 239 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 METTL1Q9UBP6 276 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 OR2W1Q9Y3N9 320 aa13.44□□□□□ -0.26
HERC3-214ENST00000601319 RBM7Q9Y580 266 aaKnown RBP13.44□□□□□ -0.26
HERC3-214ENST00000601319 G3V318 75 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 SMIM18P0DKX4 95 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 RRASP10301 218 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 LGALS7P47929 136 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 CBX3Q13185 183 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 RTL8BQ17RB0 113 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 TMEM177Q53S58 311 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 UBE2NLQ5JXB2 153 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 ZNF645Q8N7E2 425 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 C4orf3Q8WVX3 66 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 DDB2Q92466 427 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 SLC25A46Q96AG3 418 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 FUNDC2Q9BWH2 189 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
HERC3-214ENST00000601319 XRCC3O43542 346 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 TUSC2O75896 110 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 SLC22A5O76082 557 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 IGLL1P15814 213 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 DUTP33316 252 aaKnown RBP13.42□□□□□ -0.26
HERC3-214ENST00000601319 LUMP51884 338 aaPredicted RBP13.42□□□□□ -0.26
HERC3-214ENST00000601319 RPS16P62249 146 aaKnown RBP13.42□□□□□ -0.26
HERC3-214ENST00000601319 LSM3P62310 102 aaKnown RBP13.42□□□□□ -0.26
HERC3-214ENST00000601319 ZNF562Q6V9R5 426 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 LCNL1Q6ZST4 164 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 HOGA1Q86XE5 327 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 BEST4Q8NFU0 473 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 UBE2E2Q96LR5 201 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 GPR61Q9BZJ8 451 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 NECAP2Q9NVZ3 263 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 WSB1Q9Y6I7 421 aa13.42□□□□□ -0.26
HERC3-214ENST00000601319 FCN1O00602 326 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 SLC25A17O43808 307 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 CA2P00918 260 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 IGLV2-23P01705 113 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 EGR2P11161 476 aaPredicted RBP13.41□□□□□ -0.26
HERC3-214ENST00000601319 NFYAP23511 347 aaPredicted RBP13.41□□□□□ -0.26
HERC3-214ENST00000601319 CBX5P45973 191 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 TMEM65Q6PI78 240 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 PPP1R27Q86WC6 154 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 S100A16Q96FQ6 103 aaKnown RBP13.41□□□□□ -0.26
HERC3-214ENST00000601319 RAX2Q96IS3 184 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 TPSG1Q9NRR2 321 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 FOXA2Q9Y261 457 aaPredicted RBP13.41□□□□□ -0.26
HERC3-214ENST00000601319 NUBP2Q9Y5Y2 271 aa13.41□□□□□ -0.26
HERC3-214ENST00000601319 LINC00473A8K010 186 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 CCL24O00175 119 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 CRYGBP07316 175 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 ARPC4P59998 168 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 NCS1P62166 190 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 RUNX1Q01196 453 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 TMEM267Q0VDI3 215 aaPredicted RBP13.4□□□□□ -0.26
HERC3-214ENST00000601319 FHL3Q13643 280 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 KIAA0141Q14154 515 aaPredicted RBP13.4□□□□□ -0.26
HERC3-214ENST00000601319 ECSCRQ19T08 205 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 AKIRIN2Q53H80 203 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 PYHIN1Q6K0P9 492 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 OVCH2Q7RTZ1 564 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 SAMD12Q8N8I0 201 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 BVESQ8NE79 360 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
HERC3-214ENST00000601319 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
HERC3-214ENST00000601319 IGKV1D-13A0A0B4J2D9 117 aa13.39□□□□□ -0.27
HERC3-214ENST00000601319 SOX15O60248 233 aa13.39□□□□□ -0.27
HERC3-214ENST00000601319 GABARAPO95166 117 aa13.39□□□□□ -0.27
HERC3-214ENST00000601319 IGLV2-14P01704 120 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms