RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	GNG2	P59768	71 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	CX3CL1	P78423	397 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	PLGLA	Q15195	96 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	PSG5	Q15238	335 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	C19orf54	Q5BKX5	351 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	MYOZ3	Q8TDC0	251 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	RCC1L	Q96I51	464 aa	Known RBP	12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	RAX2	Q96IS3	184 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	ST6GALNAC5	Q9BVH7	336 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	SLC35D1	Q9NTN3	355 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	SPATA2	Q9UM82	520 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	TRAV41	A0A0B4J266	112 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	TMEM127	O75204	238 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	SPDEF	O95238	335 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	IGLV1-40	P01703	118 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	RPS16	P62249	146 aa	Known RBP	12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	FOXB2	Q5VYV0	432 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	MINDY2	Q8NBR6	621 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	DUX3	Q96PT4	197 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	TSNAX	Q99598	290 aa	Known RBP	12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	METTL1	Q9UBP6	276 aa	Known RBP	12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	RBM7	Q9Y580	266 aa	Known RBP	12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	TNC	P24821	2201 aa		12.09	□□□□□ -0.47
PLD3-223	ENST00000600948	TRAV18	A0A075B6X5	111 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948		A0A0A6YYH2	397 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948		A6NJ64	397 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	DUS4L	O95620	317 aa	Known RBP	12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	CTXN2	P0C2S0	81 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	LSM3	P62310	102 aa	Known RBP	12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	KIAA0141	Q14154	515 aa	Predicted RBP	12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	CNIH2	Q6PI25	160 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	FLYWCH2	Q96CP2	140 aa	Known RBP	12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	KLK15	Q9H2R5	256 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	TPSG1	Q9NRR2	321 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	NECAP2	Q9NVZ3	263 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	DNAH3	Q8TD57	4116 aa		12.08	□□□□□ -0.48
PLD3-223	ENST00000600948	CCL24	O00175	119 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	SLC25A17	O43808	307 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	SOX15	O60248	233 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	IGLV2-23	P01705	113 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	EGR2	P11161	476 aa	Predicted RBP	12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	NFYA	P23511	347 aa	Predicted RBP	12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	RPS19	P39019	145 aa	Known RBP	12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	ECSCR	Q19T08	205 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	DEFB136	Q30KP8	78 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	REC114	Q7Z4M0	266 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	CROCCP3	Q8IVE0	287 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	C4orf3	Q8WVX3	66 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	DDB2	Q92466	427 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	CLCC1	Q96S66	551 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	ANXA10	Q9UJ72	324 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	NUBP2	Q9Y5Y2	271 aa		12.07	□□□□□ -0.48
PLD3-223	ENST00000600948	CA2	P00918	260 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	HLA-DQB1	P01920	261 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	CRYGB	P07316	175 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	DUT	P33316	252 aa	Known RBP	12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	TAGLN	Q01995	201 aa	Known RBP	12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	TMEM177	Q53S58	311 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	ZNF562	Q6V9R5	426 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	ZNF491	Q8N8L2	437 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	BVES	Q8NE79	360 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	ABHD5	Q8WTS1	349 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	ADTRP	Q96IZ2	230 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	UBE2E2	Q96LR5	201 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	FUNDC2	Q9BWH2	189 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	AUNIP	Q9H7T9	357 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	DIABLO	Q9NR28	239 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	OR2W1	Q9Y3N9	320 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	A3GALT2	U3KPV4	340 aa		12.06	□□□□□ -0.48
PLD3-223	ENST00000600948	IGKV1D-13	A0A0B4J2D9	117 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948		A0A1W2PN81	502 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	LINC00473	A8K010	186 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948		J3QRK9	145 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	TUSC2	O75896	110 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	IGKV1-13	P0DP09	117 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	RRAS	P10301	218 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	CHRNA7	P36544	502 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	LGALS7	P47929	136 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	RAB9A	P51151	201 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	LUM	P51884	338 aa	Predicted RBP	12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	SSBP2	P81877	361 aa	Predicted RBP	12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	RTL8B	Q17RB0	113 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	TMEM65	Q6PI78	240 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	PPP1R27	Q86WC6	154 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	HOGA1	Q86XE5	327 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	ZNF645	Q8N7E2	425 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	GVQW1	Q8N7I0	195 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	TCTEX1D1	Q8N7M0	179 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	BEST4	Q8NFU0	473 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	HARBI1	Q96MB7	349 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	FAM103A1	Q9BTL3	118 aa	Known RBP	12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	GNB4	Q9HAV0	340 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	FOXA2	Q9Y261	457 aa	Predicted RBP	12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	VSIG4	Q9Y279	399 aa		12.05	□□□□□ -0.48
PLD3-223	ENST00000600948	SRRM4	A7MD48	611 aa	Known RBP	12.04	□□□□□ -0.48
PLD3-223	ENST00000600948		I3L521	148 aa		12.04	□□□□□ -0.48
PLD3-223	ENST00000600948	ARPC1B	O15143	372 aa	Known RBP	12.04	□□□□□ -0.48
PLD3-223	ENST00000600948	SMIM18	P0DKX4	95 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms