RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 OR5H2Q8NGV7 314 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 TINAGL1Q9GZM7 467 aaPredicted RBP10.92□□□□□ -0.66
VRK3-219ENST00000600137 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 SERTAD4Q9NUC0 356 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 OR5H14A6NHG9 310 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 M0QYG6 137 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 FGF16O43320 207 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 IGKV1-16P04430 117 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 GNRHRP30968 328 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 MSMO1Q15800 293 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 CNPY1Q3B7I2 92 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 AADACL3Q5VUY0 350 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 FAM71E2Q8N5Q1 922 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
VRK3-219ENST00000600137 MOB3AQ96BX8 217 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
VRK3-219ENST00000600137 NPFFR1Q9GZQ6 430 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 ZNF107Q9UII5 783 aaPredicted RBP10.91□□□□□ -0.66
VRK3-219ENST00000600137 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
VRK3-219ENST00000600137 RBM7Q9Y580 266 aaKnown RBP10.91□□□□□ -0.66
VRK3-219ENST00000600137 LINC01548A6NM66 108 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 SLC22A5O76082 557 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 PTBP1P26599 531 aaKnown RBP eCLIP10.9□□□□□ -0.66
VRK3-219ENST00000600137 MC5RP33032 325 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 S100A5P33763 92 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 LHFPL1Q86WI0 220 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 NPBQ8NG41 125 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 OR6F1Q8NGZ6 308 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 SECTM1Q8WVN6 248 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 TRIM63Q969Q1 353 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 MRGPRFQ96AM1 343 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 GPHA2Q96T91 129 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 SDHCQ99643 169 aaPredicted RBP10.9□□□□□ -0.66
VRK3-219ENST00000600137 PRSS22Q9GZN4 317 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 FXYD6Q9H0Q3 95 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 BEX1Q9HBH7 125 aa10.9□□□□□ -0.66
VRK3-219ENST00000600137 A0A1B0GUS0 222 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 ANKRD20A5PA0PJZ0 165 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 M0QZK8 103 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 NDUFA3O95167 84 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 THBS3P49746 956 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 FXYD4P59646 89 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 ZNF818PQ6ZRF7 136 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 MFSD4AQ8N468 514 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 OR8H1Q8NGG4 311 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 OR4C13Q8NGP0 309 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 RNF5Q99942 180 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 THAP7Q9BT49 309 aaPredicted RBP10.89□□□□□ -0.67
VRK3-219ENST00000600137 SRRQ9GZT4 340 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 WNT10AQ9GZT5 417 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 SLC5A7Q9GZV3 580 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 BATF3Q9NR55 127 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 WASHC3Q9Y3C0 194 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 RNF114Q9Y508 228 aa10.89□□□□□ -0.67
VRK3-219ENST00000600137 TNCP24821 2201 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 SRRM4A7MD48 611 aaKnown RBP10.88□□□□□ -0.67
VRK3-219ENST00000600137 IGLV2-23P01705 113 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 CRYGBP07316 175 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 TBPP20226 339 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 UCP3P55916 312 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 TAS2R19P59542 299 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 TMEM95Q3KNT9 176 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 TMEM177Q53S58 311 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 ACTBL2Q562R1 376 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 STEAP1BQ6NZ63 245 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 ZBTB34Q8NCN2 500 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 BVESQ8NE79 360 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 AKR1E2Q96JD6 320 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 SLC35D1Q9NTN3 355 aa10.88□□□□□ -0.67
VRK3-219ENST00000600137 NCBP2LA6PVI3 153 aaKnown RBP10.87□□□□□ -0.67
VRK3-219ENST00000600137 RAB3DO95716 219 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 IGHG2P01859 326 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
VRK3-219ENST00000600137 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
VRK3-219ENST00000600137 PSG5Q15238 335 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 MRGPRG-AS1Q2M3A8 158 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
VRK3-219ENST00000600137 FAAP20Q6NZ36 180 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 ZNF66Q6ZN08 573 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 ARRDC1Q8N5I2 433 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 OR4C16Q8NGL9 310 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 ADTRPQ96IZ2 230 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 ZNF747Q9BV97 191 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 LIN7CQ9NUP9 197 aaKnown RBP10.87□□□□□ -0.67
VRK3-219ENST00000600137 TRRAPQ9Y4A5 3859 aa10.87□□□□□ -0.67
VRK3-219ENST00000600137 VWFP04275 2813 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 H7C2Y5 167 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 FCN1O00602 326 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 RRHO14718 337 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 NBR2O15453 112 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 CSF1P09603 554 aa10.86□□□□□ -0.67
VRK3-219ENST00000600137 HERV-K104P61576 105 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms