RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
SMG9-210ENST00000600097 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 SACSQ9NZJ4 4579 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 HTR2CP28335 458 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 RPS16P62249 146 aaKnown RBP13.14□□□□□ -0.31
SMG9-210ENST00000600097 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
SMG9-210ENST00000600097 FXYD3Q14802 87 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 HAGHQ16775 308 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 C1orf100Q5SVJ3 147 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 OR10K2Q6IF99 312 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 ZNF773Q6PK81 442 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 GRPEL2Q8TAA5 225 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 C11orf54Q9H0W9 315 aaPredicted RBP13.14□□□□□ -0.31
SMG9-210ENST00000600097 PLEKHJ1Q9NW61 149 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 MGAT4AQ9UM21 535 aa13.14□□□□□ -0.31
SMG9-210ENST00000600097 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 IGKV1-16P04430 117 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 SRMP19623 302 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 CEACAM6P40199 344 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 HSD17B12Q53GQ0 312 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 GTSCR1Q86UQ5 136 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 PDPNQ86YL7 162 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 PTX4Q96A99 478 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 TMEM68Q96MH6 324 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 TUBA4BQ9H853 241 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
SMG9-210ENST00000600097 PROP1O75360 226 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 APOA2P02652 100 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 UCHL1P09936 223 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
SMG9-210ENST00000600097 TATDN3Q17R31 274 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
SMG9-210ENST00000600097 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 NDUFB11Q9NX14 153 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 OR1A1Q9P1Q5 309 aa13.12□□□□□ -0.31
SMG9-210ENST00000600097 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 SLC25A17O43808 307 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 CNIH1O95406 144 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 BRI3O95415 125 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 BPNT1O95861 308 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 AADACP22760 399 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 PSMB9P28065 219 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 HLA-DRB3P79483 266 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 UNC119Q13432 240 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 INSL4Q14641 139 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 IL34Q6ZMJ4 242 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 LRRTM1Q86UE6 522 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 ZNF383Q8NA42 475 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 SIGLEC8Q9NYZ4 499 aa13.11□□□□□ -0.31
SMG9-210ENST00000600097 TMEM14DPA8MWL7 114 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 JTBO76095 146 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 SNRPBP14678 240 aaKnown RBP13.1□□□□□ -0.31
SMG9-210ENST00000600097 GALP22466 123 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 RANBP1P43487 201 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 LGALS7P47929 136 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 SYNJ2BPP57105 145 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 FABP5Q01469 135 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 TMEM91Q6ZNR0 172 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 Q8N402 240 aa13.1□□□□□ -0.31
SMG9-210ENST00000600097 URM1Q9BTM9 101 aaKnown RBP13.1□□□□□ -0.31
SMG9-210ENST00000600097 PEF1Q9UBV8 284 aaKnown RBP13.1□□□□□ -0.31
SMG9-210ENST00000600097 A0A087WXM4 84 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 QRFPP83859 136 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 SSX1Q16384 188 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 ZNF343Q6P1L6 599 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.09□□□□□ -0.31
SMG9-210ENST00000600097 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 USMG5Q96IX5 58 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
SMG9-210ENST00000600097 TINAGL1Q9GZM7 467 aaPredicted RBP13.09□□□□□ -0.31
SMG9-210ENST00000600097 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 C12orf4Q9NQ89 552 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 BIRC6Q9NR09 4857 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 AK3Q9UIJ7 227 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 HSF4Q9ULV5 492 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 EPPK1P58107 5090 aaKnown RBP13.09□□□□□ -0.31
SMG9-210ENST00000600097 TNCP24821 2201 aa13.09□□□□□ -0.31
SMG9-210ENST00000600097 TRDV1A0A1B0GX56 115 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 SCTP09683 121 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 CD37P11049 281 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
SMG9-210ENST00000600097 PSMD7P51665 324 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 LINC00205P59089 165 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
SMG9-210ENST00000600097 RPEL1Q2QD12 228 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 HDHD3Q9BSH5 251 aaPredicted RBP13.08□□□□□ -0.32
SMG9-210ENST00000600097 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
SMG9-210ENST00000600097 KCNK15Q9H427 330 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms