RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DIABLOQ9NR28 239 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 KIAA1456Q9P272 454 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 RNF150Q9ULK6 438 aa14.62□□□□□ -0.07
PNKP-213ENST00000599543 KMT2CQ8NEZ4 4911 aaKnown RBP14.61□□□□□ -0.07
PNKP-213ENST00000599543 ATP6V0E1O15342 81 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 CNTFRP26992 372 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 FHL3Q13643 280 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 GVQW1Q8N7I0 195 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 OR11H1Q8NG94 326 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 ISOC1Q96CN7 298 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 S100A16Q96FQ6 103 aaKnown RBP14.61□□□□□ -0.07
PNKP-213ENST00000599543 ABHD14BQ96IU4 210 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 RITA1Q96K30 269 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 OR51J1Q9H342 316 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 MGAT4AQ9UM21 535 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 WSB1Q9Y6I7 421 aa14.61□□□□□ -0.07
PNKP-213ENST00000599543 SORL1Q92673 2214 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 CCDC160A6NGH7 325 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 G3V318 75 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 H3BMQ9 156 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 J3QRK9 145 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 ELK1P19419 428 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 TMBIM6P55061 237 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 TAS2R20P59543 309 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 C5orf64Q2M2E5 130 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 RPL39P5Q59GN2 51 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 FAM71F2Q6NXP2 309 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 OR4A4PQ8NGN8 299 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 MYOZ3Q8TDC0 251 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 RAB2BQ8WUD1 216 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 KCTD12Q96CX2 325 aaKnown RBP14.6□□□□□ -0.07
PNKP-213ENST00000599543 UBE2E2Q96LR5 201 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 C11orf54Q9H0W9 315 aaPredicted RBP14.6□□□□□ -0.07
PNKP-213ENST00000599543 IFI27L2Q9H2X8 130 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 RDH8Q9NYR8 311 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 PIPOXQ9P0Z9 390 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 CEPT1Q9Y6K0 416 aa14.6□□□□□ -0.07
PNKP-213ENST00000599543 IGHV7-81A0A0B4J1V7 117 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 TRAV41A0A0B4J266 112 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 XRCC3O43542 346 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 NOL3O60936 208 aaKnown RBP14.59□□□□□ -0.07
PNKP-213ENST00000599543 TMEM127O75204 238 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 ZNF182P17025 639 aaPredicted RBP14.59□□□□□ -0.07
PNKP-213ENST00000599543 DTYMKP23919 212 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 ZBTB25P24278 435 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 PPIFP30405 207 aaKnown RBP14.59□□□□□ -0.07
PNKP-213ENST00000599543 ECI1P42126 302 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 ARL6IP1Q15041 203 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 TMEM69Q5SWH9 247 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 LIN54Q6MZP7 749 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 NPBQ8NG41 125 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 KLK15Q9H2R5 256 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 VSIG4Q9Y279 399 aa14.59□□□□□ -0.07
PNKP-213ENST00000599543 MRPS7Q9Y2R9 242 aaKnown RBP14.59□□□□□ -0.07
PNKP-213ENST00000599543 FAM25AB3EWG3 89 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 FAM25CB3EWG5 89 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 FAM25GB3EWG6 89 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 RAB29O14966 203 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 IGLV1-40P01703 118 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 OR8U8P0C7N1 319 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 RNASE12Q5GAN4 147 aaKnown RBP14.58□□□□□ -0.08
PNKP-213ENST00000599543 FAM131AQ6UXB0 335 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 ZNF491Q8N8L2 437 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 DYNC2LI1Q8TCX1 351 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 WWC2-AS2Q96NR7 200 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 PRR25Q96S07 402 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 CABLES2Q9BTV7 478 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 GNB4Q9HAV0 340 aa14.58□□□□□ -0.08
PNKP-213ENST00000599543 A0A0A6YYH2 397 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 OR5H14A6NHG9 310 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 A6NJ64 397 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 NDUFA3O95167 84 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 ZNF616Q08AN1 781 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 PLGLAQ15195 96 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 ECSCRQ19T08 205 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 MZT2AQ6P582 158 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 GLDNQ6ZMI3 551 aaPredicted RBP14.57□□□□□ -0.08
PNKP-213ENST00000599543 SNX29P2Q8IUI4 249 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 OR1N2Q8NGR9 330 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 OR10J5Q8NHC4 309 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 ACOT12Q8WYK0 555 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 OR5B12Q96R08 314 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 GINS4Q9BRT9 223 aa14.57□□□□□ -0.08
PNKP-213ENST00000599543 TRBV6-7A0A0A0MS04 114 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 I3L521 148 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 CTDSP2O14595 271 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 APOA1P02647 267 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 OR8U9P0C7N5 309 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 RAB9AP51151 201 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 LINC00205P59089 165 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 PITPNAQ00169 270 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 RUNX1Q01196 453 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 DRAXINQ8NBI3 349 aaPredicted RBP14.56□□□□□ -0.08
PNKP-213ENST00000599543 MIXL1Q9H2W2 232 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 STAB2Q8WWQ8 2551 aa14.56□□□□□ -0.08
PNKP-213ENST00000599543 H7C2Y5 167 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 RGS5O15539 181 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 HLA-DQB1P01920 261 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 NHLRC4P0CG21 123 aaPredicted RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 CT45A6P0DMU7 189 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms