RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 KNTC1P50748 2209 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 hCG_38984A0A1B0GV85 526 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 DXOO77932 396 aaKnown RBP10.19□□□□□ -0.78
SCN8A-208ENST00000599343 RND3P61587 244 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 GPR82Q96P67 336 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 A0A1W2PS18 150 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 FCARP24071 287 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 DPH3Q96FX2 82 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 WDR54Q9H977 334 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 RREB1Q92766 1687 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 TSPAN13O95857 204 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 CHODLQ9H9P2 273 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 CISD1Q9NZ45 108 aaKnown RBP10.18□□□□□ -0.78
SCN8A-208ENST00000599343 NUP214P35658 2090 aaPredicted RBP10.18□□□□□ -0.78
SCN8A-208ENST00000599343 A0A0B4J293 547 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 TRBV5-5A0A0J9YX44 114 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 ZFP36L2P47974 494 aaKnown RBP10.18□□□□□ -0.78
SCN8A-208ENST00000599343 LY6EQ16553 131 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 BIVMQ86UB2 503 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 QTRT1Q9BXR0 403 aaKnown RBP10.18□□□□□ -0.78
SCN8A-208ENST00000599343 IGHV4-34P06331 123 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 MC5RP33032 325 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 OR4D5Q8NGN0 318 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
SCN8A-208ENST00000599343 IDI2-AS1Q9NZ38 188 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 PCM1Q15154 2024 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 NPBWR2P48146 333 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF56Q15929 161 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 CALYQ9NYX4 217 aa10.18□□□□□ -0.78
SCN8A-208ENST00000599343 GDF9O60383 454 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 S1PR2O95136 353 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 HLA-DRB1P01911 266 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 SELENOTP62341 195 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 AQP3Q92482 292 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 DNAJC4Q9NNZ3 241 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 A0A1B0GV90 55 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 WNT9BO14905 357 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 LIMS1P48059 325 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 TRIP11Q15643 1979 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 IGHV1-45A0A0A0MS14 117 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 IGKV3-20P01619 116 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 CD1AP06126 327 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 FHITP49789 147 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 OR13C6PQ8NH95 151 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 SLC25A38Q96DW6 304 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 ALS2Q96Q42 1657 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 GPX1P07203 203 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 ARF6P62330 175 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 PSG9Q00887 426 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 C1QTNF12Q5T7M4 302 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 CLEC2AQ6UVW9 174 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 MMD2Q8IY49 270 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 OR10AG1Q8NH19 301 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 WFDC6Q9BQY6 131 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 DLL3Q9NYJ7 618 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 MFAP4P55083 255 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 PEAR1Q5VY43 1037 aaPredicted RBP10.17□□□□□ -0.78
SCN8A-208ENST00000599343 ABHD12Q8N2K0 398 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 ST6GALNAC3Q8NDV1 305 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 SPAG17Q6Q759 2223 aa10.17□□□□□ -0.78
SCN8A-208ENST00000599343 SCN1AP35498 2009 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 HAX1O00165 279 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 EGR1P18146 543 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 TNFRSF9Q07011 255 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 CIRBPQ14011 172 aaKnown RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 HOXD4P09016 255 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 C8orf88P0DMB2 117 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 PRSS53Q2L4Q9 553 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 CYB5R2Q6BCY4 276 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 FAM214BQ7L5A3 538 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 OR4C13Q8NGP0 309 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 ERASQ7Z444 233 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 STPG3Q8N7X2 389 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 THY1P04216 161 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 RELQ04864 619 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF501Q96CX3 271 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 TIMP4Q99727 224 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 LINC00470Q9BZP3 86 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 C5orf66Q9H5L9 145 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 H2BFSP57053 126 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 LEMD1Q68G75 181 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 SLC25A47Q6Q0C1 308 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 FADS6Q8N9I5 356 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 GALNT14Q96FL9 552 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 AQP10Q96PS8 301 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 DIRC2Q96SL1 478 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 TMEM160Q9NX00 188 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
SCN8A-208ENST00000599343 SOX21Q9Y651 276 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-208ENST00000599343 IGKV1-8A0A0C4DH67 115 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 FUT5Q11128 374 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF818PQ6ZRF7 136 aa10.15□□□□□ -0.78
SCN8A-208ENST00000599343 GOLT1AQ6ZVE7 132 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms