RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	OR5H8	P0DN80	308 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	CLDN12	P56749	244 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	RUNX1	Q01196	453 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	ZNF616	Q08AN1	781 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	P2RY14	Q15391	338 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	C1orf100	Q5SVJ3	147 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	STEAP3	Q658P3	488 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	TRAT1	Q6PIZ9	186 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	ZNF833P	Q6ZTB9	187 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	OR1N2	Q8NGR9	330 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	IFI27L2	Q9H2X8	130 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	KCNK15	Q9H427	330 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	DIABLO	Q9NR28	239 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	JPT1	Q9UK76	154 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223		A0A0B4J203	849 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	TRAV41	A0A0B4J266	112 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	METTL21EP	A6NDL7	271 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	FAM90A7P	A6NKC0	464 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	FAM90A23P	A8MXZ1	464 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	NBR2	O15453	112 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	PDCD6	O75340	191 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	SCGN	O76038	276 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	TPPP	O94811	219 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	LY86	O95711	162 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	BPNT1	O95861	308 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	FUT3	P21217	361 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	CHAT	P28329	748 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	SLURP1	P55000	103 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	C5orf64	Q2M2E5	130 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	MINDY2	Q8NBR6	621 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	OR5H6	Q8NGV6	325 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	DCUN1D4	Q92564	292 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	LYST	Q99698	3801 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	SULT4A1	Q9BR01	284 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	SRR	Q9GZT4	340 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	PARP12	Q9H0J9	701 aa	Known RBP	11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	RAB9B	Q9NP90	201 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	RHBDL2	Q9NX52	303 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	GHRL	Q9UBU3	117 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	VSIG4	Q9Y279	399 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	CSMD3	Q7Z407	3707 aa		11.36	□□□□□ -0.59
IRF3-223	ENST00000599223	CA11	O75493	328 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	NDUFA3	O95167	84 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	CD37	P11049	281 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	RAB9A	P51151	201 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	HMGN3	Q15651	99 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	ECSCR	Q19T08	205 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	C2orf76	Q3KRA6	126 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	TMEM69	Q5SWH9	247 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	OR10K2	Q6IF99	312 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	SBSPON	Q8IVN8	264 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223		Q8N402	240 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	NPB	Q8NG41	125 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	PTX4	Q96A99	478 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	ZNF251	Q9BRH9	671 aa		11.35	□□□□□ -0.59
IRF3-223	ENST00000599223	MRPS7	Q9Y2R9	242 aa	Known RBP	11.35	□□□□□ -0.59
IRF3-223	ENST00000599223		A0A0A6YYH2	397 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223		A6NJ64	397 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	ST8SIA5	O15466	376 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	SPN	P16150	400 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	RAB6A	P20340	208 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	MRPS10	P82664	201 aa	Known RBP	11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	HTD2	P86397	168 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	TRIM16L	Q309B1	348 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	HACD4	Q5VWC8	232 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	TMEM65	Q6PI78	240 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	OVCH2	Q7RTZ1	564 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	ZNF554	Q86TJ5	538 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	SETD6	Q8TBK2	473 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	DLX4	Q92988	240 aa	Predicted RBP	11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	CST11	Q9H112	138 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	ATG5	Q9H1Y0	275 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	TPSG1	Q9NRR2	321 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	RAB22A	Q9UL26	194 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	SMAD5-AS1	Q9Y6J3	95 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	DNAH1	Q9P2D7	4330 aa		11.34	□□□□□ -0.59
IRF3-223	ENST00000599223	IGHV4OR15-8	A0A075B7B6	117 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223		A0A087WW49	117 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223		A0A1W2PN81	502 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	C3orf84	H3BNL1	204 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	OVOL1	O14753	267 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	YPEL1	O60688	119 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	GLA	P06280	429 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	EGR2	P11161	476 aa	Predicted RBP	11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	IL7	P13232	177 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	CHRNA7	P36544	502 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	INSL3	P51460	131 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	ZNF79	Q15937	498 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	RPL39P5	Q59GN2	51 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	C6orf201	Q7Z4U5	140 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	LYSMD2	Q8IV50	215 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	POC5	Q8NA72	575 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	KCNG3	Q8TAE7	436 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	ARPC1A	Q92747	370 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	RCHY1	Q96PM5	261 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	YPEL2	Q96QA6	119 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	SOST	Q9BQB4	213 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	NICN1	Q9BSH3	213 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	TOLLIP	Q9H0E2	274 aa		11.33	□□□□□ -0.6

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