RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 SRRM4A7MD48 611 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 M0QZK8 103 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 FCN1O00602 326 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 PEX14O75381 377 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 PPYP01298 95 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 HRH1P35367 487 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 VDAC2P45880 294 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 MMDQ15546 238 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 BVESQ8NE79 360 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 NPBQ8NG41 125 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 DIRAS2Q96HU8 199 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 NOL4LQ96MY1 436 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 EHFQ9NZC4 300 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 RBMX2Q9Y388 322 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 WASHC3Q9Y3C0 194 aa11.23□□□□□ -0.61
SHKBP1-217ENST00000598558 H7C2Y5 167 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 M0QYG6 137 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 TPPPO94811 219 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 NDUFA3O95167 84 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 IGHG2P01859 326 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 CD28P10747 220 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 MC5RP33032 325 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 OR5H2Q8NGV7 314 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 DGCR14Q96DF8 476 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 FBXL15Q9H469 300 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 SLC35D1Q9NTN3 355 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
SHKBP1-217ENST00000598558 NBR2O15453 112 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 IGLV2-23P01705 113 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 RCVRNP35243 200 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 THBS3P49746 956 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 FXYD4P59646 89 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 PSG5Q15238 335 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 C5orf64Q2M2E5 130 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
SHKBP1-217ENST00000598558 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 RRHO14718 337 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 TNFSF12O43508 249 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 RBBP9O75884 186 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 CD3DP04234 171 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 CRYGBP07316 175 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 GNRHRP30968 328 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 TAS2R46P59540 309 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 RPS16P62249 146 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 IL18Q14116 193 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 PYHIN1Q6K0P9 492 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 ZNF818PQ6ZRF7 136 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 SLC35E3Q7Z769 313 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 PDPNQ86YL7 162 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 MOB3AQ96BX8 217 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 MMP27Q9H306 513 aa11.2□□□□□ -0.62
SHKBP1-217ENST00000598558 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 CTDSPLO15194 276 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 APOA2P02652 100 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 NDPQ00604 133 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 TMEM177Q53S58 311 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 OR2B11Q5JQS5 317 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 TMEM17Q86X19 198 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 OR5AU1Q8NGC0 362 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 SMIM4Q8WVI0 70 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 FLYWCH2Q96CP2 140 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 CLCC1Q96S66 551 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 RNF5Q99942 180 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 FBXO7Q9Y3I1 522 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 A3GALT2U3KPV4 340 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 V9GYH0 126 aa11.19□□□□□ -0.62
SHKBP1-217ENST00000598558 FABP12A6NFH5 140 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 A6NHS1 94 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 SLC22A5O76082 557 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 HLA-DRB1P01911 266 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 CD74P04233 296 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 ZNF735P0CB33 412 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 PJVKQ0ZLH3 352 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 VAX1Q5SQQ9 334 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 AADACL3Q5VUY0 350 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 LIN54Q6MZP7 749 aa11.18□□□□□ -0.62
SHKBP1-217ENST00000598558 CENPVQ7Z7K6 275 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms