RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 IGSF11Q5DX21 431 aa13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 PYHIN1Q6K0P9 492 aa13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 OR1N2Q8NGR9 330 aa13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 FLYWCH2Q96CP2 140 aaKnown RBP13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 FOXA2Q9Y261 457 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-203ENST00000597209 A0A0B4J203 849 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 A0A1W2PN81 502 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 M0R1X1 148 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 BET1O15155 118 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 SOX15O60248 233 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 PSMB9P28065 219 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 CHRNA7P36544 502 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 LGALS7P47929 136 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 LINC00205P59089 165 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 ZNF616Q08AN1 781 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 PPP1R27Q86WC6 154 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 SLC35D1Q9NTN3 355 aa13.92□□□□□ -0.18
CHMP2A-203ENST00000597209 SEC14L6B5MCN3 397 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 OR8U9P0C7N5 309 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 DTYMKP23919 212 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 TALDO1P37837 337 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 INSL3P51460 131 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 LUMP51884 338 aaPredicted RBP13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 GNB1P62873 340 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 ARFRP1Q13795 201 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 ASPHD1Q5U4P2 390 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 ATG5Q9H1Y0 275 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 OR2D2Q9H210 308 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 SDHAF2Q9NX18 166 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 SCOCQ9UIL1 159 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 SSR3Q9UNL2 185 aa13.91□□□□□ -0.18
CHMP2A-203ENST00000597209 A0A075B6Q4 140 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 SCGNO76038 276 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 CA2P00918 260 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 CDNFQ49AH0 187 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 UNQ5815/PRO19632Q6UWF5 114 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 ABHD5Q8WTS1 349 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 CLCC1Q96S66 551 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 B9D2Q9BPU9 175 aa13.9□□□□□ -0.18
CHMP2A-203ENST00000597209 IGLV2-23P01705 113 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 CRYGBP07316 175 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 LGALS1P09382 135 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 RRASP10301 218 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 ACTBL2Q562R1 376 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 HACD4Q5VWC8 232 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 LFNGQ8NES3 379 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 MAFIPQ8WZ33 124 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 ARPC1AQ92747 370 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 C5orf30Q96GV9 206 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 OR5B12Q96R08 314 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 GINS4Q9BRT9 223 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 DCSTAMPQ9H295 470 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 SLA2Q9H6Q3 261 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 TPSG1Q9NRR2 321 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 A3GALT2U3KPV4 340 aa13.89□□□□□ -0.19
CHMP2A-203ENST00000597209 SLC25A17O43808 307 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 CTXN2P0C2S0 81 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 CD40LGP29965 261 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 SCAND1P57086 179 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 PITPNAQ00169 270 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 CBX3Q13185 183 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 FXYD3Q14802 87 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 ZNF260Q3ZCT1 412 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 ADTRPQ96IZ2 230 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 RHOVQ96L33 236 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 TMEM68Q96MH6 324 aa13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 ELF5Q9UKW6 265 aaPredicted RBP13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 RBM7Q9Y580 266 aaKnown RBP13.88□□□□□ -0.19
CHMP2A-203ENST00000597209 IGKV1D-8A0A087WSZ0 117 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 SMIM30A4D0T7 59 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 LINC01619G3V211 115 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 H3BUA1 57 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 SNRPBP14678 240 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 RTL8BQ17RB0 113 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 VAX1Q5SQQ9 334 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 SFXN4Q6P4A7 337 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 DDB2Q92466 427 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 DCUN1D4Q92564 292 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 OR51E2Q9H255 320 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 RRP15Q9Y3B9 282 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 LSM4Q9Y4Z0 139 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-203ENST00000597209 OVOL1O14753 267 aa13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 DUTP33316 252 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 SSBP2P81877 361 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 CD69Q07108 199 aa13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 ZNF429Q86V71 674 aa13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 BVESQ8NE79 360 aa13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 HARBI1Q96MB7 349 aa13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-203ENST00000597209 SHOXO15266 292 aa13.85□□□□□ -0.19
CHMP2A-203ENST00000597209 BRI3O95415 125 aa13.85□□□□□ -0.19
CHMP2A-203ENST00000597209 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms