RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 LINC00205P59089 165 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 RPS16P62249 146 aaKnown RBP8.2□□□□□ -1.1
CCDC9-203ENST00000596938 PITPNAQ00169 270 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 SFXN4Q6P4A7 337 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 FLYWCH2Q96CP2 140 aaKnown RBP8.2□□□□□ -1.1
CCDC9-203ENST00000596938 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 SDHAF2Q9NX18 166 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 DAPK2Q9UIK4 370 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 ELF5Q9UKW6 265 aaPredicted RBP8.2□□□□□ -1.1
CCDC9-203ENST00000596938 VSIG4Q9Y279 399 aa8.2□□□□□ -1.1
CCDC9-203ENST00000596938 RRP15Q9Y3B9 282 aaKnown RBP8.2□□□□□ -1.1
CCDC9-203ENST00000596938 IGKV1D-8A0A087WSZ0 117 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 I3L521 148 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
CCDC9-203ENST00000596938 CD36P16671 472 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 NDPQ00604 133 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 FHL3Q13643 280 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 PLGLAQ15195 96 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 ZNF260Q3ZCT1 412 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 H1FOOQ8IZA3 346 aaPredicted RBP8.19□□□□□ -1.1
CCDC9-203ENST00000596938 OR5M8Q8NGP6 311 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 MAFIPQ8WZ33 124 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 DPF1Q92782 380 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 GINS4Q9BRT9 223 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 ST6GALNAC5Q9BVH7 336 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 OR2D2Q9H210 308 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 METTL1Q9UBP6 276 aaKnown RBP8.19□□□□□ -1.1
CCDC9-203ENST00000596938 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
CCDC9-203ENST00000596938 FBXO7Q9Y3I1 522 aa8.19□□□□□ -1.1
CCDC9-203ENST00000596938 K7EIL1 84 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 CRYGBP07316 175 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 CLEC2LP0C7M8 214 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 RRASP10301 218 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
CCDC9-203ENST00000596938 LUMP51884 338 aaPredicted RBP8.18□□□□□ -1.1
CCDC9-203ENST00000596938 NEDD8Q15843 81 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 DEFB136Q30KP8 78 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 OR11H1Q8NG94 326 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 OR1N2Q8NGR9 330 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 ADTRPQ96IZ2 230 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 RNF167Q9H6Y7 350 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 RHBDL2Q9NX52 303 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 RBM7Q9Y580 266 aaKnown RBP8.18□□□□□ -1.1
CCDC9-203ENST00000596938 ETV7Q9Y603 341 aa8.18□□□□□ -1.1
CCDC9-203ENST00000596938 A0A0A6YYH2 397 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 LOC100506127A0A0U1RQW1 187 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 A0A1W2PN81 502 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 TMEM235A6NFC5 223 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 A6NJ64 397 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 SLC25A17O43808 307 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 SOX15O60248 233 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 RAMP3O60896 148 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 SLC22A5O76082 557 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CA2P00918 260 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CD40LGP29965 261 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CHRNA7P36544 502 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 RAB25P57735 213 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 MXD1Q05195 221 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 ZNF616Q08AN1 781 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CBX3Q13185 183 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 FXYD3Q14802 87 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 ECSCRQ19T08 205 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 TIMM50Q3ZCQ8 353 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 TMEM177Q53S58 311 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 ACTBL2Q562R1 376 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CNIH2Q6PI25 160 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 LFNGQ8NES3 379 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 LGALS14Q8TCE9 139 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 DDB2Q92466 427 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 OR2W1Q9Y3N9 320 aa8.17□□□□□ -1.1
CCDC9-203ENST00000596938 DNAH9Q9NYC9 4486 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 A0A087WXM4 84 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SRRM4A7MD48 611 aaKnown RBP8.16□□□□□ -1.1
CCDC9-203ENST00000596938 SSX5O60225 188 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 OR8U8P0C7N1 319 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 DUTP33316 252 aaKnown RBP8.16□□□□□ -1.1
CCDC9-203ENST00000596938 GNG2P59768 71 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 DGCR2P98153 550 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 RTL8BQ17RB0 113 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 IDNKQ5T6J7 187 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 C9orf66Q5T8R8 295 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 UNQ5815/PRO19632Q6UWF5 114 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 CROCCP3Q8IVE0 287 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 TEX45Q8NA69 505 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 BVESQ8NE79 360 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 TSPAN14Q8NG11 270 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 OR5H6Q8NGV6 325 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 ABHD5Q8WTS1 349 aa8.16□□□□□ -1.1
CCDC9-203ENST00000596938 NUDCD2Q8WVJ2 157 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms