RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 LIN54Q6MZP7 749 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 DHRS11Q6UWP2 260 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 OVCH2Q7RTZ1 564 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 DDB2Q92466 427 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 FLYWCH2Q96CP2 140 aaKnown RBP14.41□□□□□ -0.1
ZNF558-204ENST00000596172 MIXL1Q9H2W2 232 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 SLC35D1Q9NTN3 355 aa14.41□□□□□ -0.1
ZNF558-204ENST00000596172 LINC01548A6NM66 108 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 CTDSP2O14595 271 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 RRHO14718 337 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 SPDEFO95238 335 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 IGLV2-14P01704 120 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 IGF1P05019 195 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 LGALS7P47929 136 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 TAS2R46P59540 309 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 C2orf68Q2NKX9 166 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 SNX29P2Q8IUI4 249 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 LYSMD2Q8IV50 215 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 STPG2Q8N412 459 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 C11orf44Q8N8P7 122 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 TSNAXQ99598 290 aaKnown RBP14.4□□□□□ -0.1
ZNF558-204ENST00000596172 GON7Q9BXV9 100 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 EXTL2Q9UBQ6 330 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 ZNF107Q9UII5 783 aaPredicted RBP14.4□□□□□ -0.1
ZNF558-204ENST00000596172 RBMX2Q9Y388 322 aaKnown RBP14.4□□□□□ -0.1
ZNF558-204ENST00000596172 VWFP04275 2813 aa14.4□□□□□ -0.1
ZNF558-204ENST00000596172 PSMB11A5LHX3 300 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF701M0R085 212 aaPredicted RBP14.39□□□□□ -0.11
ZNF558-204ENST00000596172 PPYP01298 95 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 FCER2P06734 321 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 AADACP22760 399 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 DYRK1AQ13627 763 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 RTL8BQ17RB0 113 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 NDUFA11Q86Y39 141 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 COMMD1Q8N668 190 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 ZBTB34Q8NCN2 500 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 NOL4LQ96MY1 436 aaPredicted RBP14.39□□□□□ -0.11
ZNF558-204ENST00000596172 CITED2Q99967 270 aaPredicted RBP14.39□□□□□ -0.11
ZNF558-204ENST00000596172 HSPB9Q9BQS6 159 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 SLIRPQ9GZT3 109 aaKnown RBP14.39□□□□□ -0.11
ZNF558-204ENST00000596172 MGAM2Q2M2H8 2515 aa14.39□□□□□ -0.11
ZNF558-204ENST00000596172 J3QRK9 145 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RGS5O15539 181 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RCVRNP35243 200 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RPS16P62249 146 aaKnown RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 SLC35B1P78383 322 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 CBX3Q13185 183 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 EIF4EBP1Q13541 118 aaPredicted RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 PSG5Q15238 335 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 TMEM177Q53S58 311 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 TCTEX1D4Q5JR98 221 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF660Q6AZW8 331 aaPredicted RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 OR4X2Q8NGF9 303 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 OR5H2Q8NGV7 314 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 HSD17B10Q99714 261 aaKnown RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RBM38Q9H0Z9 239 aaKnown RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 EHFQ9NZC4 300 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RABL2AQ9UBK7 228 aaPredicted RBP14.38□□□□□ -0.11
ZNF558-204ENST00000596172 RABL2BQ9UNT1 228 aa14.38□□□□□ -0.11
ZNF558-204ENST00000596172 IGHV7-81A0A0B4J1V7 117 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 LINC00473A8K010 186 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 OPN1MWP04001 364 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 CSF1P09603 554 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 OPN1MW2P0DN77 364 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 OPN1MW3P0DN78 364 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 RFX2P48378 723 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 TREML4Q6UXN2 200 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF66Q6ZN08 573 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 LAX1Q8IWV1 398 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 BVESQ8NE79 360 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 ABHD1Q96SE0 405 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 NXF2Q9GZY0 626 aaKnown RBP14.37□□□□□ -0.11
ZNF558-204ENST00000596172 MMP27Q9H306 513 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 OR51J1Q9H342 316 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 FBXL15Q9H469 300 aa14.37□□□□□ -0.11
ZNF558-204ENST00000596172 ADARB2-AS1A8MUL3 147 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 IGLV2-23P01705 113 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 PMP2P02689 132 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 C10orf99Q6UWK7 81 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF329Q86UD4 541 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 SECTM1Q8WVN6 248 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 METTL1Q9UBP6 276 aaKnown RBP14.36□□□□□ -0.11
ZNF558-204ENST00000596172 RSL24D1Q9UHA3 163 aaKnown RBP14.36□□□□□ -0.11
ZNF558-204ENST00000596172 LINC00527Q9UJ94 153 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 PRELID3BQ9Y3B1 194 aa14.36□□□□□ -0.11
ZNF558-204ENST00000596172 TSSC4Q9Y5U2 329 aaPredicted RBP14.36□□□□□ -0.11
ZNF558-204ENST00000596172 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 HLA-DMAP28067 261 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 HRH1P35367 487 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 CRIP2P52943 208 aaPredicted RBP14.35□□□□□ -0.11
ZNF558-204ENST00000596172 RPL30P62888 115 aaKnown RBP14.35□□□□□ -0.11
ZNF558-204ENST00000596172 MRPS10P82664 201 aaKnown RBP14.35□□□□□ -0.11
ZNF558-204ENST00000596172 CFHR3Q02985 330 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 PLGLAQ15195 96 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 TEX38Q6PEX7 206 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 ZNF562Q6V9R5 426 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 OR6F1Q8NGZ6 308 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 OSR1Q8TAX0 266 aaPredicted RBP14.35□□□□□ -0.11
ZNF558-204ENST00000596172 BORCS5Q969J3 196 aa14.35□□□□□ -0.11
ZNF558-204ENST00000596172 MOB3AQ96BX8 217 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms