RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GOSR2O14653 212 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 KCNAB3O43448 404 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 CCNKO75909 580 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 SERPINE2P07093 398 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 SULT1A3P0DMM9 295 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 SULT1A4P0DMN0 295 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 THBS3P49746 956 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 DLX1P56177 255 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 PRB3Q04118 309 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 PAX8Q06710 450 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 KRTAP1-1Q07627 177 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 ANKRD55Q3KP44 614 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 NCR3LG1Q68D85 454 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 TCTEX1D1Q8N7M0 179 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 BEND2Q8NDZ0 799 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 GLYATL2Q8WU03 294 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 C5orf30Q96GV9 206 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 ADTRPQ96IZ2 230 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 LIN7CQ9NUP9 197 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 PRR13Q9NZ81 148 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNRD1Q9P1U0 126 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 PRELID3BQ9Y3B1 194 aa10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 AMMECR1Q9Y4X0 333 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-209ENST00000595803 ARHGAP32A7KAX9 2087 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 PROP1O75360 226 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 IFNA21P01568 189 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 ARG1P05089 322 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 UCP1P25874 307 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 DUTP33316 252 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 LPAR6P43657 344 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 EIF4EBP1Q13541 118 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 HLA-DRB5Q30154 266 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 DCAF12L2Q5VW00 463 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 DRAXINQ8NBI3 349 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 OR11H7Q8NGC8 314 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF251Q9BRH9 671 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM222Q9H0R3 208 aa10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 UNKLQ9H9P5 680 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-209ENST00000595803 A0A096LNT2 108 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 C5orf51A6NDU8 294 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 FAM25EA8MYX2 175 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 CDS2O95674 445 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 IGLV1-47P01700 117 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 HOXB5P09067 269 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 HLA-GP17693 338 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 HTR1DP28221 377 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 KIR2DS2P43631 304 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 GZMKP49863 264 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 LGALS4P56470 323 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 CD83Q01151 205 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 KLRD1Q13241 179 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 GSG1LQ6UXU4 331 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 C1orf229Q6ZS94 237 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 ZNF833PQ6ZTB9 187 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 SELENOHQ8IZQ5 122 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 SPAG16Q8N0X2 631 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 LRTM2Q8N967 370 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 LHX4Q969G2 390 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 MSI2Q96DH6 328 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 TBX15Q96SF7 602 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 RAB18Q9NP72 206 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 AUP1Q9Y679 476 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
SHKBP1-209ENST00000595803 A0A1W2PRD5 423 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 A0A1W2PRF3 423 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 A0A1W2PRM7 423 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 LINC00473A8K010 186 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 A8MV72 311 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 LEUTXA8MZ59 168 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 RNASEK-C17orf49H0YIS7 233 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 FCGR3BO75015 233 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 ATG12O94817 140 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 SIX6O95475 246 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 TGFAP01135 160 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 GAPDHP04406 335 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CT45A6P0DMU7 189 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CT45A5P0DMU8 189 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CT45A7P0DMV0 189 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 MMP9P14780 707 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 RPA2P15927 270 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CXCL3P19876 107 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 EPHA1P21709 976 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 GATA3P23771 443 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 CEACAM3P40198 252 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 LINC00205P59089 165 aa10.6□□□□□ -0.71
SHKBP1-209ENST00000595803 C2orf68Q2NKX9 166 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms