RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 PDPNQ86YL7 162 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 RCC1LQ96I51 464 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 RAX2Q96IS3 184 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 GINS4Q9BRT9 223 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 KLK15Q9H2R5 256 aa17.43■□□□□ 0.38
GTF2F1-204ENST00000594965 TRAV41A0A0B4J266 112 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 AIREO43918 545 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 OR5H8P0DN80 308 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 EGR2P11161 476 aaPredicted RBP17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 CRIP2P52943 208 aaPredicted RBP17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 CX3CL1P78423 397 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 PITPNAQ00169 270 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 TIMM50Q3ZCQ8 353 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 MINDY2Q8NBR6 621 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 SLC35D1Q9NTN3 355 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 METTL1Q9UBP6 276 aaKnown RBP17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 SPATA2Q9UM82 520 aa17.42■□□□□ 0.38
GTF2F1-204ENST00000594965 APOA2P02652 100 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 RPS19P39019 145 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 GNG2P59768 71 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 RPS16P62249 146 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 LSM3P62310 102 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 PLGLAQ15195 96 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 DEFB136Q30KP8 78 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 VCX3AQ9NNX9 186 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 TPSG1Q9NRR2 321 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 NECAP2Q9NVZ3 263 aa17.41■□□□□ 0.38
GTF2F1-204ENST00000594965 TRAV18A0A075B6X5 111 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 CCL24O00175 119 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 SPDEFO95238 335 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 IGLV2-23P01705 113 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 FLYWCH2Q96CP2 140 aaKnown RBP17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 CLCC1Q96S66 551 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 TSNAXQ99598 290 aaKnown RBP17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 AURKAIP1Q9NWT8 199 aaPredicted RBP17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 RBM7Q9Y580 266 aaKnown RBP17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
GTF2F1-204ENST00000594965 SOX15O60248 233 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 TMEM127O75204 238 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 CRYGBP07316 175 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 NFYAP23511 347 aaPredicted RBP17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 ECSCRQ19T08 205 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 CNIH2Q6PI25 160 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 DDB2Q92466 427 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 ANXA10Q9UJ72 324 aa17.39■□□□□ 0.37
GTF2F1-204ENST00000594965 A0A0A6YYH2 397 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 A6NJ64 397 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 J3QRK9 145 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 SLC25A17O43808 307 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 DUS4LO95620 317 aaKnown RBP17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 CA2P00918 260 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 CTXN2P0C2S0 81 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 DUTP33316 252 aaKnown RBP17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 SSBP2P81877 361 aaPredicted RBP17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 ZNF562Q6V9R5 426 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 REC114Q7Z4M0 266 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 ZNF491Q8N8L2 437 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 BVESQ8NE79 360 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 C4orf3Q8WVX3 66 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 FAM103A1Q9BTL3 118 aaKnown RBP17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 GNB4Q9HAV0 340 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 OR2W1Q9Y3N9 320 aa17.38■□□□□ 0.37
GTF2F1-204ENST00000594965 IGKV1D-13A0A0B4J2D9 117 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 SRRM4A7MD48 611 aaKnown RBP17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 LINC00473A8K010 186 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 IGLV2-14P01704 120 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 HLA-DQB1P01920 261 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 IGKV1-13P0DP09 117 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 PTHLHP12272 177 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 RAB9AP51151 201 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 KRTAP10-11P60412 298 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 TMEM177Q53S58 311 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 CROCCP3Q8IVE0 287 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 GVQW1Q8N7I0 195 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 UBE2E2Q96LR5 201 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 AUNIPQ9H7T9 357 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 A3GALT2U3KPV4 340 aa17.37■□□□□ 0.37
GTF2F1-204ENST00000594965 A0A1W2PN81 502 aa17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 ARPC1BO15143 372 aaKnown RBP17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 CHRNA7P36544 502 aa17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 TAGLNQ01995 201 aaKnown RBP17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 PPP1R27Q86WC6 154 aa17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 FUNDC2Q9BWH2 189 aa17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 DIABLOQ9NR28 239 aa17.36■□□□□ 0.37
GTF2F1-204ENST00000594965 TUSC2O75896 110 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 SMIM18P0DKX4 95 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 LGALS7P47929 136 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 LUMP51884 338 aaPredicted RBP17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 EGFEM1PQ0D2K5 195 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 PJVKQ0ZLH3 352 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 FHL3Q13643 280 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 MRGPRG-AS1Q2M3A8 158 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 TMEM65Q6PI78 240 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 HOGA1Q86XE5 327 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 ZNF645Q8N7E2 425 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 ABHD5Q8WTS1 349 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 CASTOR1Q8WTX7 329 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 ADTRPQ96IZ2 230 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 HARBI1Q96MB7 349 aa17.35■□□□□ 0.37
GTF2F1-204ENST00000594965 FOXA2Q9Y261 457 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms